Key Laboratory of Development and Evaluation of Chemical and Herbal Drugs for Animal Use, College of Veterinary Medicine, China Agricultural University, Beijing 100193, PR China.
J Antimicrob Chemother. 2011 Nov;66(11):2521-6. doi: 10.1093/jac/dkr322. Epub 2011 Jul 26.
To investigate the presence and the genetic environment of the multiresistance gene cfr in naturally occurring Gram-negative bacteria of pigs.
A total of 391 bacterial isolates with florfenicol MICs of ≥16 mg/L, obtained from 557 nasal swabs of individual pigs, were screened by PCR for the known florfenicol resistance genes. The species assignment of the cfr-carrying isolate was based on the results of Gram's staining, colony morphology, 16S rDNA sequencing and biochemical profiling. The location of the cfr and floR genes was determined by Southern blotting and the regions flanking the cfr gene were sequenced by a modified random primer walking strategy.
A single Proteus vulgaris isolate, which carried the genes floR and cfr, was detected in this study. A cfr-carrying segment of 7 kb with homology to a staphylococcal plasmid was found to be inserted into the chromosomal fimD gene of P. vulgaris. This segment was flanked by two IS26 elements located in the same orientation, which are believed to have played a role in this integration process. Stability testing via inverse PCR approaches showed that this integrate is not entirely stable, but the cfr-carrying centre region plus one IS26 copy can be looped out via IS26-mediated recombination.
To the best of our knowledge, this is the first report of the cfr gene in a naturally occurring Gram-negative bacterium. Surveillance and monitoring of the cfr gene in Gram-negative bacteria are warranted with respect to food safety and consumer protection.
研究天然存在的猪源革兰氏阴性菌中多耐药基因 cfr 的存在及其遗传环境。
从 557 份个体猪鼻拭子中获得了 391 株氟苯尼考 MIC 值≥16mg/L 的细菌分离株,通过 PCR 对已知的氟苯尼考耐药基因进行筛选。基于革兰氏染色、菌落形态、16S rDNA 测序和生化特征分析的结果,对携带 cfr 基因的分离株进行种属鉴定。通过 Southern 印迹杂交确定 cfr 和 floR 基因的位置,并通过改良的随机引物步移策略对 cfr 基因侧翼区进行测序。
本研究仅检测到一株携带 floR 和 cfr 基因的普通变形杆菌。发现一个 7kb 的 cfr 携带片段与葡萄球菌质粒具有同源性,插入普通变形杆菌的 fimD 基因中。该片段两侧为两个同向排列的 IS26 元件,据信它们在整合过程中发挥了作用。通过反向 PCR 方法进行的稳定性测试表明,这种整合并不完全稳定,但 cfr 携带中心区域加上一个 IS26 拷贝可以通过 IS26 介导的重组而环出。
据我们所知,这是首次在天然存在的革兰氏阴性菌中发现 cfr 基因。有必要对食品安全性和消费者保护方面的革兰氏阴性菌中的 cfr 基因进行监测和监控。