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肌营养不良蛋白外显子14剪接受体位点的G到T颠换显示出多种剪接结果,而转换突变并未体现这些结果。

A G-to-T transversion at the splice acceptor site of dystrophin exon 14 shows multiple splicing outcomes that are not exemplified by transition mutations.

作者信息

Ota Mitsunori, Takeshima Yasuhiro, Nishida Atsushi, Awano Hiroyuki, Lee Tomoko, Yagi Mariko, Matsuo Masafumi

机构信息

Department of Pediatrics, Graduate School of Medicine, Kobe University, Kobe, Japan.

出版信息

Genet Test Mol Biomarkers. 2012 Jan;16(1):3-8. doi: 10.1089/gtmb.2010.0276. Epub 2011 Aug 19.

Abstract

Mutations at splicing consensus sequences have been shown to induce splicing errors such as exon skipping or cryptic splice site activation. Here, we identified eight splicing products caused by a G-to-T transversion mutation at the splice acceptor site of exon 14 of the dystrophin gene (c.1603-1G>T). Unexpectedly, the most abundant product showed skipping of the two consecutive exons 14 and 15, and exon 14 skipping was observed as the second most abundant product. To examine the cause of this splicing multiplicity, minigenes containing dystrophin exons 14 and 15 with their flanking introns were constructed and subjected to in vitro splicing. Minigenes with the wild-type sequence or a G>A transition at position c.1603-1 produced only the mature mRNA. On the other hand, the minigenes with a G>T or G>C transversion mutation produced multiple splicing products. A time-course analysis of the in vitro splicing revealed that splicing of the middle intron, intron 14, was the first step in transcript maturation for all four minigene constructs. The identity of the mutant nucleotide, but not its position, is a factor leading to multiple splicing outcomes. Our results suggest that exon skipping therapy for Duchenne's muscular dystrophy should be carefully monitored for their splicing outcomes.

摘要

已证明剪接共有序列处的突变会引发剪接错误,如外显子跳跃或隐蔽剪接位点激活。在此,我们鉴定出由肌营养不良蛋白基因第14外显子剪接受体位点的G到T颠换突变(c.1603 - 1G>T)导致的8种剪接产物。出乎意料的是,最丰富的产物显示连续的第14和15外显子跳跃,而第14外显子跳跃是第二丰富的产物。为了研究这种剪接多样性的原因,构建了包含肌营养不良蛋白第14和15外显子及其侧翼内含子的微型基因,并进行体外剪接。具有野生型序列或c.1603 - 1位置G>A转换的微型基因仅产生成熟mRNA。另一方面,具有G>T或G>C颠换突变的微型基因产生多种剪接产物。体外剪接的时间进程分析表明,中间内含子即内含子14的剪接是所有四种微型基因构建体转录本成熟的第一步。突变核苷酸的身份而非其位置是导致多种剪接结果的一个因素。我们的结果表明,对于杜氏肌营养不良症的外显子跳跃疗法,应仔细监测其剪接结果。

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