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细菌中新的运动机制的出现和模块进化。

Emergence and modular evolution of a novel motility machinery in bacteria.

机构信息

Institut de Microbiologie de la Méditerranée (IFR88)-Laboratoire de Chimie Bactérienne, CNRS UPR 9043, Marseille, France.

出版信息

PLoS Genet. 2011 Sep;7(9):e1002268. doi: 10.1371/journal.pgen.1002268. Epub 2011 Sep 8.

Abstract

Bacteria glide across solid surfaces by mechanisms that have remained largely mysterious despite decades of research. In the deltaproteobacterium Myxococcus xanthus, this locomotion allows the formation stress-resistant fruiting bodies where sporulation takes place. However, despite the large number of genes identified as important for gliding, no specific machinery has been identified so far, hampering in-depth investigations. Based on the premise that components of the gliding machinery must have co-evolved and encode both envelope-spanning proteins and a molecular motor, we re-annotated known gliding motility genes and examined their taxonomic distribution, genomic localization, and phylogeny. We successfully delineated three functionally related genetic clusters, which we proved experimentally carry genes encoding the basal gliding machinery in M. xanthus, using genetic and localization techniques. For the first time, this study identifies structural gliding motility genes in the Myxobacteria and opens new perspectives to study the motility mechanism. Furthermore, phylogenomics provide insight into how this machinery emerged from an ancestral conserved core of genes of unknown function that evolved to gliding by the recruitment of functional modules in Myxococcales. Surprisingly, this motility machinery appears to be highly related to a sporulation system, underscoring unsuspected common mechanisms in these apparently distinct morphogenic phenomena.

摘要

尽管经过几十年的研究,细菌在固体表面滑行的机制仍然很大程度上是个谜。在δ变形菌粘球菌中,这种运动方式允许形成抗应激的子实体,从而进行孢子形成。然而,尽管已经确定了大量对滑行很重要的基因,但到目前为止还没有发现特定的机制,这阻碍了深入的研究。基于滑行机制的组成部分必须共同进化并编码包膜贯穿蛋白和分子马达的前提,我们重新注释了已知的滑行运动基因,并检查了它们的分类分布、基因组定位和系统发育。我们使用遗传和定位技术成功地划定了三个功能相关的遗传簇,实验证明它们在粘球菌中携带编码基本滑行机制的基因。这项研究首次在粘细菌中鉴定出结构滑行运动基因,并为研究运动机制开辟了新的视角。此外,系统发生基因组学提供了深入了解这种机制是如何从一个未知功能的祖先保守核心基因中出现的,通过在粘球菌目中招募功能模块来进化为滑行。令人惊讶的是,这种运动机制似乎与孢子形成系统密切相关,这突显了这些明显不同的形态发生现象中存在意想不到的共同机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f4/3169522/6afb682f261f/pgen.1002268.g001.jpg

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