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人类感染的代谢组学研究。

Metabolomic investigations of human infections.

作者信息

Pacchiarotta Tiziana, Deelder André M, Mayboroda Oleg A

机构信息

LUMC, Biomolecular Mass Spectrometry Unit, Leiden University Medical Centre, L4-Q, PO Box 9600, 2300RC Leiden, The Netherlands.

出版信息

Bioanalysis. 2012 May;4(8):919-25. doi: 10.4155/bio.12.61.

Abstract

Metabolomics has a special place among other 'omics' disciplines (genomics, transcriptomics and proteomics) as it describes the most dynamic level of biological regulation and, as such, provides the most direct reflection of the physiological status of an organism. Quick development of the analytical technologies in the first place - MS and NMR - has enabled the metabolomics analysis of such complex biological phenomena as host-pathogen interactions in the development of infection. In this review, an overview of the metabolomics studies of infectious diseases carried out on human material is provided. The relevant papers on the metabolomics of human infectious diseases are comprehensively summarized in a table, including, for example, information on the study design, number of subjects, employed technology and metabolic discriminator. Future considerations, such as importance of the time-resolved study designs and the embedment of metabolomics in large-scale epidemiological studies are discussed.

摘要

代谢组学在其他“组学”学科(基因组学、转录组学和蛋白质组学)中占有特殊地位,因为它描述了生物调节最动态的层面,因此能最直接地反映生物体的生理状态。首先是分析技术——质谱(MS)和核磁共振(NMR)——的快速发展,使得对感染发展过程中宿主-病原体相互作用等复杂生物现象进行代谢组学分析成为可能。在这篇综述中,提供了对基于人体材料开展的传染病代谢组学研究的概述。关于人类传染病代谢组学的相关论文在一个表格中进行了全面总结,包括例如研究设计、受试者数量、所采用的技术和代谢判别指标等信息。还讨论了未来的考量因素,如时间分辨研究设计的重要性以及将代谢组学纳入大规模流行病学研究等。

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