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(甘氨酰-脯氨酰-羟脯氨酸)9 肽的晶体结构:对胶原蛋白分子模型的启示。

Crystal structure of (Gly-Pro-Hyp)(9) : implications for the collagen molecular model.

机构信息

Department of Macromolecular Science, Osaka University, Toyonaka, Osaka, Japan.

出版信息

Biopolymers. 2012 Aug;97(8):607-16. doi: 10.1002/bip.22048.

Abstract

Collagens have long been believed to adopt a triple-stranded molecular structure with a 10/3 symmetry (ten triplet units in three turns) and an axial repeat of 29 Å. This belief even persisted after an alternative structure with a 7/2 symmetry (seven triplet units in two turns) with an axial repeat of 20 Å had been proposed. The uncertainty regarding the helical symmetry of collagens is attributed to inadequate X-ray fiber diffraction data. Therefore, for better understanding of the collagen helix, single-crystal analyses of peptides with simplified characteristic amino acid sequences and similar compositions to collagens have long been awaited. Here we report the crystal structure of (Gly-Pro-Hyp)(9) peptide at a resolution of 1.45 Å. The repeating unit of this peptide, Gly-Pro-Hyp, is the most typical sequence present in collagens, and it has been used as a basic repeating unit in fiber diffraction analyses of collagen. The (Gly-Pro-Hyp)(9) peptide adopts a triple-stranded structure with an average helical symmetry close to the ideal 7/2 helical model for collagen. This observation strongly suggests that the average molecular structure of collagen is not the accepted Rich and Crick 10/3 helical model but is a 7/2 helical conformation.

摘要

胶原蛋白一直被认为具有三股螺旋分子结构,具有 10/3 对称性(三圈中有十个三联体单位)和 29Å 的轴向重复。即使在提出具有 7/2 对称性(两圈中有七个三联体单位)和 20Å 轴向重复的替代结构后,这种信念仍然存在。胶原蛋白螺旋对称性的不确定性归因于 X 射线纤维衍射数据不足。因此,为了更好地了解胶原蛋白螺旋,人们一直期待对具有简化特征氨基酸序列和类似组成的胶原蛋白的肽进行单晶分析。在这里,我们报告了(Gly-Pro-Hyp)(9)肽的晶体结构,分辨率为 1.45Å。该肽的重复单元 Gly-Pro-Hyp 是胶原蛋白中最典型的序列,它一直被用作胶原蛋白纤维衍射分析的基本重复单元。(Gly-Pro-Hyp)(9)肽采用三股螺旋结构,平均螺旋对称性接近胶原蛋白的理想 7/2 螺旋模型。这一观察结果强烈表明,胶原蛋白的平均分子结构不是公认的 Rich 和 Crick 10/3 螺旋模型,而是 7/2 螺旋构象。

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