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用于 Vellozia gigantea(半日花科)的微卫星标记,这是一种仅限于巴西岩生植被的狭窄特有种。

Microsatellite markers for Vellozia gigantea (Velloziaceae), a narrowly endemic species to the Brazilian campos rupestres.

机构信息

Departamento de Botânica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Av. Antônio Carlos 6627, Belo Horizonte, Minas Gerais, Brazil.

出版信息

Am J Bot. 2012 Jul;99(7):e289-91. doi: 10.3732/ajb.1100611. Epub 2012 Jun 25.

Abstract

PREMISE OF THE STUDY

Microsatellite primers were developed for the first time in Velloziaceae, in the endangered species Vellozia gigantea.

METHODS AND RESULTS

Using two different protocols, seven primer sets were characterized in three populations of V. gigantea. The primers amplified di- and trinucleotide repeats with six to 12 alleles per locus. These revealed high levels of genetic variation, presenting an average observed heterozygosity of 0.508 in V. gigantea. The seven primers were tested for cross-amplification in three Vellozia species. All primers successfully amplified in V. auriculata. Six primers amplified in V. compacta and three in V. hirsuta.

CONCLUSIONS

The new marker set described here will be useful for studies of population genetics of V. gigantea. The cross-amplification results indicate the utility of primers for studies in other Vellozia species.

摘要

研究前提

首次在 Velloziaceae 科,濒危物种大蔓榕(Vellozia gigantea)中开发出微卫星引物。

方法和结果

使用两种不同的方案,在三个大蔓榕种群中对七个引物组进行了特征描述。这些引物扩增了二核苷酸和三核苷酸重复序列,每个位点有 6 到 12 个等位基因。这些结果显示出了高水平的遗传变异,大蔓榕的平均观察杂合度为 0.508。这七个引物在三个 Vellozia 物种中进行了交叉扩增测试。所有引物均在 V. auriculata 中成功扩增,六个引物在 V. compacta 中扩增,三个引物在 V. hirsuta 中扩增。

结论

这里描述的新标记组将有助于研究大蔓榕的种群遗传学。交叉扩增结果表明引物可用于其他 Vellozia 物种的研究。

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