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铜绿假单胞菌效应器-免疫系统 Tse1/Tsi1 的结构见解。

Structural insights into the effector-immunity system Tse1/Tsi1 from Pseudomonas aeruginosa.

机构信息

Department of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Heidelberg, Germany.

出版信息

PLoS One. 2012;7(7):e40453. doi: 10.1371/journal.pone.0040453. Epub 2012 Jul 6.

Abstract

During an interbacterial battle, the type-6-secretion-system (T6SS) of the human pathogen Pseudomonas aeruginosa injects the peptidoglycan(PG)-hydrolase Tse1 into the periplasm of gram-negative enemy cells and induces their lysis. However, for its own benefit, P. aeruginosa produces and transports the immunity-protein Tsi1 into its own periplasm where in prevents accidental exo- and endogenous intoxication. Here we present the high-resolution X-ray crystal structure of the lytic enzyme Tse1 and describe the mechanism by which Tse1 cleaves the γ-D-glutamyl-l-meso-diaminopimelic acid amide bond of crosslinked PG. Tse1 belongs to the superfamily of N1pC/P60 peptidases but is unique among described members of this family of which the structure was described, since it is a single domain protein without any putative localization domain. Most importantly, we present the crystal structure of Tse1 bound to its immunity-protein Tsi1 as well and describe the mechanism of enzyme inhibition. Tsi1 occludes the active site of Tse1 and abolishes its enzyme activity by forming a hydrogen bond to a catalytically important histidine residue in Tse1. Based on our structural findings in combination with a bioinfomatic approach we also identified a related system in Burkholderia phytofirmans. Not only do our findings point to a common catalytic mechanism of the Tse1 PG-hydrolases, but we can also show that it is distinct from other members of this superfamily. Furthermore, we provide strong evidence that the mechanism of enzyme inhibition between Tsi1 orthologues is conserved. This work is the first structural description of an entire effector/immunity pair injected by the T6SS system. Moreover, it is also the first example of a member of the N1pC/P60 superfamily which becomes inhibited upon binding to its cognate immunity protein.

摘要

在细菌间的战斗中,人类病原体铜绿假单胞菌的 6 型分泌系统(T6SS)将肽聚糖(PG)水解酶 Tse1 注入革兰氏阴性敌细胞的周质,并诱导其裂解。然而,为了自身利益,铜绿假单胞菌产生并将免疫蛋白 Tsi1 运送到自己的周质中,在那里它可以防止意外的内源性和外源性中毒。在这里,我们呈现了裂解酶 Tse1 的高分辨率 X 射线晶体结构,并描述了 Tse1 切割交联 PG 的 γ-D-谷氨酰-L-正亮氨酰-D-二氨基庚二酸酰胺键的机制。Tse1 属于 N1pC/P60 肽酶超家族,但在该家族的所有已描述成员中是独一无二的,因为它是一种没有任何假定定位结构域的单结构域蛋白。最重要的是,我们还呈现了 Tse1 与免疫蛋白 Tsi1 结合的晶体结构,并描述了酶抑制的机制。Tsi1 占据了 Tse1 的活性位点,并通过与 Tse1 中一个催化重要的组氨酸残基形成氢键来抑制其酶活性。基于我们的结构发现,并结合生物信息学方法,我们还在伯克霍尔德氏菌中鉴定出了一个相关系统。我们的发现不仅指出了 Tse1 PG 水解酶的共同催化机制,而且还表明它与该超家族的其他成员不同。此外,我们还提供了强有力的证据表明,Tsi1 同源物之间的酶抑制机制是保守的。这项工作是首次对 T6SS 系统注射的整个效应物/免疫物对进行结构描述。此外,它也是第一个与同源免疫蛋白结合后被抑制的 N1pC/P60 超家族成员的例子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0870/3391265/22be61973e1e/pone.0040453.g001.jpg

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