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新型 B(12)依赖性酰基辅酶 A 变位酶及其生物技术潜力。

Novel B(12)-dependent acyl-CoA mutases and their biotechnological potential.

机构信息

Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, MI 48109-0600, USA.

出版信息

Biochemistry. 2012 Aug 7;51(31):6039-46. doi: 10.1021/bi300827v. Epub 2012 Jul 23.

Abstract

The recent spate of discoveries of novel acyl-CoA mutases has engendered a growing appreciation for the diversity of 5'-deoxyadenosylcobalamin-dependent rearrangement reactions. The prototype of the reaction catalyzed by these enzymes is the 1,2 interchange of a hydrogen atom with a thioester group leading to a change in the degree of carbon skeleton branching. These enzymes are predicted to share common architectural elements: a Rossman fold and a triose phosphate isomerase (TIM)-barrel domain for binding cofactor and substrate, respectively. Within this family, methylmalonyl-CoA mutase (MCM) is the best studied and is the only member found in organisms ranging from bacteria to man. MCM interconverts (2R)-methylmalonyl-CoA and succinyl-CoA. The more recently discovered family members include isobutyryl-CoA mutase (ICM), which interconverts isobutyryl-CoA and n-butyryl-CoA; ethylmalonyl-CoA mutase, which interconverts (2R)-ethylmalonyl-CoA and (2S)-methylsuccinyl-CoA; and 2-hydroxyisobutyryl-CoA mutase, which interconverts 2-hydroxyisobutyryl-CoA and (3S)-hydroxybutyryl-CoA. A variant in which the two subunits of ICM are fused to a G-protein chaperone, IcmF, has been described recently. In addition to its ICM activity, IcmF also catalyzes the interconversion of isovaleryl-CoA and pivalyl-CoA. This review focuses on the involvement of acyl-CoA mutases in central carbon and secondary bacterial metabolism and on their biotechnological potential for applications ranging from bioremediation to stereospecific synthesis of C2-C5 carboxylic acids and alcohols, and for production of potential commodity and specialty chemicals.

摘要

最近,人们发现了一系列新型酰基辅酶 A 变位酶,这使得人们越来越意识到 5'-脱氧腺嘌呤核苷钴胺素依赖性重排反应的多样性。这些酶催化的反应原型是氢原子与硫酯基团的 1,2 交换,导致碳骨架分支程度的变化。这些酶被预测具有共同的结构元件:一个 Rossman 折叠和一个三磷酸甘油醛异构酶(TIM)桶结构域,分别用于结合辅因子和底物。在这个家族中,甲基丙二酰辅酶 A 变位酶(MCM)是研究最多的,也是唯一在从细菌到人等生物中发现的成员。MCM 可使(2R)-甲基丙二酰辅酶 A 和琥珀酰辅酶 A 相互转化。最近发现的家族成员包括异丁酰辅酶 A 变位酶(ICM),它可使异丁酰辅酶 A 和正丁酰辅酶 A 相互转化;乙基丙二酰辅酶 A 变位酶,可使(2R)-乙基丙二酰辅酶 A 和(2S)-甲基琥珀酰辅酶 A 相互转化;以及 2-羟基异丁酰辅酶 A 变位酶,可使 2-羟基异丁酰辅酶 A 和(3S)-羟基丁酰辅酶 A 相互转化。最近描述了一种变体,其中 ICM 的两个亚基融合到 G 蛋白伴侣 IcmF 中。除了其 ICM 活性外,IcmF 还催化异戊酰辅酶 A 和特戊酰辅酶 A 的相互转化。本综述重点介绍酰基辅酶 A 变位酶在中心碳和次级细菌代谢中的作用及其在生物技术中的潜在应用,从生物修复到 C2-C5 羧酸和醇的立体特异性合成,以及潜在商品和特种化学品的生产。

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