Costa B F, Rodrigues L A, Ruas E A, Souza L B, Ruas C F, Vieira B G, Conson A R O, Ruas P M
Departamento de Agronomia, Centro de Ciências Agrárias, Universidade Estadual de Londrina, Londrina, PR, Brasil.
Genet Mol Res. 2012 Aug 13;11(3):2338-42. doi: 10.4238/2012.August.13.7.
Parapiptadenia rigida, locally known as angico, is a tropical tree common in the semideciduous Brazilian forest. Its wood is naturally resistant to insect attack and is useful for construction. Extracts from the tree have medicinal properties. We characterized nine microsatellite loci for P. rigida. Thirty-five alleles were detected in a sample of 45 individuals from 3 different populations, with an average of 3.9 alleles per locus. The average polymorphic information content ranged from 0.099 to 0.640. Observed and expected heterozygosities varied from 0.111 to 0.489 and from 0.106 to 0.707, respectively. One locus exhibited significant deviation from Hardy-Weinberg equilibrium and four pairs of loci showed significant linkage disequilibrium. All nine primers were tested for cross-amplification in species from the Fabaceae-Mimosoidea family, yielding a transferability success rate of 7 loci in Stryphnodendron adstringens to 0 transferred loci in Pithecellobium incuriale and Inga marginata. These microsatellites will be valuable to study population genetics of this and other species where primer transferability was detected.
硬叶拟派普藤,当地称为安吉科,是一种热带树木,在巴西半落叶森林中很常见。其木材天然抗虫,可用于建筑。该树的提取物具有药用特性。我们对硬叶拟派普藤的9个微卫星位点进行了特征分析。在来自3个不同种群的45个个体的样本中检测到35个等位基因,每个位点平均有3.9个等位基因。平均多态信息含量在0.099至0.640之间。观察到的杂合度和预期杂合度分别在0.111至0.489和0.106至0.707之间。一个位点表现出与哈迪-温伯格平衡的显著偏差,四对位点显示出显著的连锁不平衡。对所有九个引物在豆科含羞草亚科的物种中进行了交叉扩增测试,在收敛串果藤中7个位点可成功转移,而在弯曲猴耳环和边缘印加树中0个位点可转移。这些微卫星对于研究该物种以及检测到引物可转移性的其他物种的群体遗传学将具有重要价值。