School of Biological Sciences, Queen's University Belfast, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK.
Biochimie. 2013 Apr;95(4):751-8. doi: 10.1016/j.biochi.2012.10.027. Epub 2012 Nov 8.
A DNA sequence encoding a protein with predicted EF-hand and dynein light chain binding domains was identified in a Fasciola hepatica EST library. Sequence analysis of the encoded protein revealed that the most similar known protein was the Fasciola gigantica protein FgCaBP3 and so this newly identified protein was named FhCaBP3. Molecular modelling of FhCaBP3 predicted a highly flexible N-terminal region, followed by a domain containing two EF-hand motifs the second of which is likely to be a functioning divalent ion binding site. The C-terminal domain of the protein contains a dynein light chain like region. Interestingly, molecular modelling predicts that calcium ion binding to the N-terminal domain destabilises the β-sheet structure of the C-terminal domain. FhCaBP3 can be expressed in, and purified from, Escherichia coli. The recombinant protein dimerises and the absence of calcium ions appeared to promote dimerisation. Native gel shift assays demonstrated that the protein bound to calcium and manganese ions, but not to magnesium, barium, zinc, strontium, nickel, copper or cadmium ions. FhCaBP3 interacted with the calmodulin antagonists trifluoperazine, N-(6-aminohexyl)-5-chloro-1-naphthalenesulfonamide and chlorpromazine as well as the myosin regulatory light chain-binding drug praziquantel. Despite sequence and structural similarities to other members of the same protein family from F. hepatica, FhCaBP3 has different biochemical properties to the other well characterised family members, FH22 and FhCaBP4. This suggests that each member of this trematode calcium-binding family has discrete functional roles within the organism.
在 Fasciola hepatica EST 文库中鉴定到一个编码具有预测 EF 手和动力蛋白轻链结合域的蛋白质的 DNA 序列。对编码蛋白的序列分析表明,最相似的已知蛋白是 Fasciola gigantica 蛋白 FgCaBP3,因此这个新鉴定的蛋白被命名为 FhCaBP3。FhCaBP3 的分子建模预测其具有高度灵活的 N 端区域,其后是包含两个 EF 手基序的结构域,第二个基序可能是一个功能二价离子结合位点。该蛋白的 C 端结构域包含一个类似于动力蛋白轻链的区域。有趣的是,分子建模预测钙离子结合到 N 端结构域会使 C 端结构域的β-折叠结构不稳定。FhCaBP3 可以在大肠杆菌中表达和纯化。重组蛋白二聚化,并且钙离子的缺失似乎促进了二聚化。天然凝胶迁移分析表明,该蛋白与钙和锰离子结合,但不与镁、钡、锌、锶、镍、铜或镉离子结合。FhCaBP3 与钙调蛋白拮抗剂三氟拉嗪、N-(6-氨基己基)-5-氯-1-萘磺酰胺和氯丙嗪以及肌球蛋白调节轻链结合药物吡喹酮相互作用。尽管与 Fasciola hepatica 同一蛋白家族的其他成员具有序列和结构相似性,但 FhCaBP3 具有与其他经过充分表征的家族成员 FH22 和 FhCaBP4 不同的生化特性。这表明该吸虫钙结合家族的每个成员在生物体中都具有独特的功能作用。