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2013 年 泛蛋白资源库(UniProt)活动更新。

Update on activities at the Universal Protein Resource (UniProt) in 2013.

机构信息

The EMBL Outstation, The European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

出版信息

Nucleic Acids Res. 2013 Jan;41(Database issue):D43-7. doi: 10.1093/nar/gks1068. Epub 2012 Nov 17.

Abstract

The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to support biological research by providing a freely accessible, stable, comprehensive, fully classified, richly and accurately annotated protein sequence knowledgebase. It integrates, interprets and standardizes data from numerous resources to achieve the most comprehensive catalogue of protein sequences and functional annotation. UniProt comprises four major components, each optimized for different uses, the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the UniProt Metagenomic and Environmental Sequence Database. UniProt is produced by the UniProt Consortium, which consists of groups from the European Bioinformatics Institute (EBI), the SIB Swiss Institute of Bioinformatics (SIB) and the Protein Information Resource (PIR). UniProt is updated and distributed every 4 weeks and can be accessed online for searches or downloads.

摘要

通用蛋白质资源(UniProt)(http://www.uniprot.org)的任务是通过提供免费访问、稳定、全面、完全分类、丰富且准确注释的蛋白质序列知识库,来支持生物研究。它整合、解释和标准化来自众多资源的数据,以实现最全面的蛋白质序列和功能注释目录。UniProt 由四个主要部分组成,每个部分都针对不同的用途进行了优化,分别是 UniProt 档案、UniProt 知识库、UniProt 参考簇和 UniProt 宏基因组和环境序列数据库。UniProt 由 UniProt 联盟制作,该联盟由欧洲生物信息学研究所(EBI)、瑞士生物信息学研究所(SIB)和蛋白质信息资源(PIR)的小组组成。UniProt 每 4 周更新和分发一次,可在线访问进行搜索或下载。

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本文引用的文献

1
Solving the Problem: Genome Annotation Standards before the Data Deluge.
Stand Genomic Sci. 2011 Oct 15;5(1):168-93. doi: 10.4056/sigs.2084864. Epub 2011 Oct 1.
2
NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy.
Nucleic Acids Res. 2012 Jan;40(Database issue):D130-5. doi: 10.1093/nar/gkr1079. Epub 2011 Nov 24.
3
Reorganizing the protein space at the Universal Protein Resource (UniProt).
Nucleic Acids Res. 2012 Jan;40(Database issue):D71-5. doi: 10.1093/nar/gkr981. Epub 2011 Nov 18.
4
UniPathway: a resource for the exploration and annotation of metabolic pathways.
Nucleic Acids Res. 2012 Jan;40(Database issue):D761-9. doi: 10.1093/nar/gkr1023. Epub 2011 Nov 18.
5
InterPro in 2011: new developments in the family and domain prediction database.
Nucleic Acids Res. 2012 Jan;40(Database issue):D306-12. doi: 10.1093/nar/gkr948. Epub 2011 Nov 16.
6
Ensembl 2012.
Nucleic Acids Res. 2012 Jan;40(Database issue):D84-90. doi: 10.1093/nar/gkr991. Epub 2011 Nov 15.
7
BioMart: driving a paradigm change in biological data management.
Database (Oxford). 2011 Nov 13;2011:bar049. doi: 10.1093/database/bar049. Print 2011.
8
The International Nucleotide Sequence Database Collaboration.
Nucleic Acids Res. 2012 Jan;40(Database issue):D33-7. doi: 10.1093/nar/gkr1006. Epub 2011 Nov 12.
9
Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species.
Nucleic Acids Res. 2012 Jan;40(Database issue):D91-7. doi: 10.1093/nar/gkr895. Epub 2011 Nov 8.

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