Institute of Biochemistry and Molecular Biology, University of Bonn, Nussallee 11, Bonn 53115, Germany.
BMC Biochem. 2013 Jan 10;14:2. doi: 10.1186/1471-2091-14-2.
Hepatoma-derived growth factor (HDGF) is a protein which is highly expressed in a variety of tumours. HDGF has mitogenic, angiogenic, neurotrophic and antiapoptotic activity but the molecular mechanisms by which it exerts these activities are largely unknown nor has its biological function in tumours been elucidated. Mass spectrometry was performed to analyse the HDGFStrep-tag interactome. By Pull-down-experiments using different protein and nucleic acid constructs the interaction of HDGF and nucleolin was investigated further.
A number of HDGFStrep-tag copurifying proteins were identified which interact with RNA or are involved in the cellular DNA repair machinery. The most abundant protein, however, copurifying with HDGF in this approach was nucleolin. Therefore we focus on the characterization of the interaction of HDGF and nucleolin in this study. We show that expression of a cytosolic variant of HDGF causes a redistribution of nucleolin into the cytoplasm. Furthermore, formation of HDGF/nucleolin complexes depends on bcl-2 mRNA. Overexpression of full length bcl-2 mRNA increases the number of HDGF/nucleolin complexes whereas expression of only the bcl-2 coding sequence abolishes interaction completely. Further examination reveals that the coding sequence of bcl-2 mRNA together with either the 5' or 3' UTR is sufficient for formation of HDGF/nucleolin complexes. When bcl-2 coding sequence within the full length cDNA is replaced by a sequence coding for secretory alkaline phosphatase complex formation is not enhanced.
The results provide evidence for the existence of HDGF and nucleolin containing nucleoprotein complexes which formation depends on the presence of specific mRNAs. The nature of these RNAs and other components of the complexes should be investigated in future.
肝癌衍生生长因子 (HDGF) 是一种在多种肿瘤中高度表达的蛋白质。HDGF 具有有丝分裂原、血管生成、神经营养和抗凋亡活性,但它发挥这些活性的分子机制在很大程度上尚不清楚,其在肿瘤中的生物学功能也尚未阐明。采用质谱分析法分析了 HDGF-Strep-tag 相互作用组。通过使用不同的蛋白质和核酸构建体进行下拉实验,进一步研究了 HDGF 与核仁蛋白的相互作用。
鉴定出许多与 RNA 相互作用或参与细胞 DNA 修复机制的 HDGF-Strep-tag 共纯化蛋白。然而,在这种方法中与 HDGF 共纯化的最丰富的蛋白质是核仁蛋白。因此,我们在本研究中专注于 HDGF 和核仁蛋白相互作用的表征。我们表明,细胞质变体 HDGF 的表达导致核仁蛋白重新分布到细胞质中。此外,HDGF/核仁蛋白复合物的形成取决于 bcl-2 mRNA。全长 bcl-2 mRNA 的过表达增加了 HDGF/核仁蛋白复合物的数量,而仅表达 bcl-2 编码序列则完全消除了相互作用。进一步检查表明,bcl-2 mRNA 的编码序列以及 5' 或 3'UTR 足以形成 HDGF/核仁蛋白复合物。当全长 cDNA 中的 bcl-2 编码序列被编码分泌碱性磷酸酶的序列取代时,复合物的形成不会增强。
这些结果为存在含有核仁蛋白的 HDGF 和核仁蛋白复合物提供了证据,其形成取决于特定 mRNAs 的存在。这些 RNA 的性质以及复合物的其他成分应在未来进行研究。