Institut für Genetik, Universität zu Köln, Köln, Germany.
Math Biosci. 2013 Apr;242(2):195-200. doi: 10.1016/j.mbs.2013.01.010. Epub 2013 Feb 6.
We consider exact enumerations and probabilistic properties of ranked trees when generated under the random coalescent process. Using a new approach, based on generating functions, we derive several statistics such as the exact probability of finding k cherries in a ranked tree of fixed size n. We then extend our method to consider also the number of pitchforks. We find a recursive formula to calculate the joint and conditional probabilities of cherries and pitchforks when the size of the tree is fixed. These results provide insights into structural properties of coalescent trees under the model of neutral evolution.
我们考虑了在随机合并过程下生成的排序树的精确枚举和概率性质。使用一种新的基于生成函数的方法,我们推导出了一些统计量,例如在固定大小为 n 的排序树中找到 k 个樱桃的精确概率。然后,我们将方法扩展到考虑叉树的数量。我们找到了一个递归公式来计算当树的大小固定时樱桃和叉树的联合和条件概率。这些结果为中性进化模型下合并树的结构性质提供了深入的了解。