State Key Laboratory of Marine Geology, Tongji University, Shanghai 200092, People's Republic of China.
J Microbiol Biotechnol. 2013 May;23(5):602-13. doi: 10.4014/jmb.1209.09040.
This paper aims at an investigation of the features of bacterial communities in surface sediments of the South China Sea (SCS). In particular, biogeographical distribution patterns and the phylogenetic diversity of bacteria found in sediments collected from a coral reef platform, a continental slope, and a deep-sea basin were determined. Bacterial diversity was measured by an observation of 16S rRNA genes, and 18 phylogenetic groups were identified in the bacterial clone library. Planctomycetes, Deltaproteobacteria, candidate division OP11, and Alphaproteobacteria made up the majority of the bacteria in the samples, with their mean bacterial clones being 16%, 15%, 12%, and 9%, respectively. By comparison, the bacterial communities found in the SCS surface sediments were significantly different from other previously observed deep-sea bacterial communities. This research also emphasizes the fact that geographical factors have an impact on the biogeographical distribution patterns of bacterial communities. For instance, canonical correspondence analyses illustrated that the percentage of sand weight and water depth are important factors affecting the bacterial community composition. Therefore, this study highlights the importance of adequately determining the relationship between geographical factors and the distribution of bacteria in the world's seas and oceans.
本研究旨在调查南海(SCS)表层沉积物中细菌群落的特征。具体而言,我们确定了在珊瑚礁平台、大陆斜坡和深海盆地采集的沉积物中细菌的生物地理分布模式和系统发育多样性。通过对 16S rRNA 基因的观察来测量细菌多样性,并在细菌克隆文库中鉴定出 18 个系统发育群。浮霉菌门、δ变形菌门、候选门 OP11 和 α变形菌门构成了样品中大多数细菌,其平均细菌克隆分别为 16%、15%、12%和 9%。相比之下,南海表层沉积物中的细菌群落与其他先前观察到的深海细菌群落有显著差异。本研究还强调了地理因素对细菌群落生物地理分布模式的影响。例如,典范对应分析表明,沙重百分比和水深是影响细菌群落组成的重要因素。因此,本研究强调了充分确定世界海洋中地理因素与细菌分布之间关系的重要性。