Max Planck Research Unit for Molecular Neurogenetics, 60438 Frankfurt, Germany.
Mol Cell Neurosci. 2013 Nov;57:120-9. doi: 10.1016/j.mcn.2013.08.001. Epub 2013 Aug 17.
In the mouse, the sense of smell relies predominantly on the expression of ~1200 odorant receptor (OR) genes in the main olfactory epithelium (MOE). Each mature olfactory sensory neuron (OSN) in the MOE is thought to express just one of these OR genes; conversely, an OR gene is expressed in thousands to tens of thousands of OSNs per mouse. Here, we have characterized temporal patterns of OR gene expression in a cohort of inbred C57BL6/N mice from the Aged Rodent Colonies of the National Institute on Aging. We applied the NanoString multiplex platform to quantify RNA abundance for 531 OR genes in whole olfactory mucosa (WOM) tissue samples. The five study groups were females aged 2, 6, 12, 18, and 31 months (mo). We classified the 531 temporal patterns using a step-down quadratic regression method for time course analysis. The majority of OR genes (58.4%) are classified as flat: there is no significant difference from a horizontal line within this time window. There are 32.8% of OR genes with a downward profile, 7.2% with an upward profile, and 1.7% with a convex or concave profile. But the magnitude of these decreases and increases tends to be small: only 4.3% of OR genes are differentially expressed (DE) at 31 mo compared to 2 mo. Interestingly, the variances of NanoString counts for individual OR genes are homogeneous among the age groups. Our analyses of these 15,930 OR gene expression data of C57BL6/N mice that were raised and housed under well-controlled conditions indicate that OR gene expression at the MOE level is intrinsically stable.
在小鼠中,嗅觉主要依赖于主要嗅觉上皮(MOE)中~1200 个气味受体(OR)基因的表达。MOE 中的每个成熟嗅觉感觉神经元(OSN)被认为仅表达这些 OR 基因中的一个;相反,一个 OR 基因在每只小鼠的数千到数万个 OSN 中表达。在这里,我们对来自国家老龄化研究所老年啮齿动物群体的近交 C57BL6/N 小鼠的一批 OR 基因表达的时间模式进行了表征。我们应用 NanoString 多重平台对 531 个 OR 基因在整个嗅黏膜(WOM)组织样本中的 RNA 丰度进行定量。五个研究组是年龄为 2、6、12、18 和 31 个月(mo)的雌性。我们使用逐步二次回归方法对 531 个时间模式进行分类,用于时间过程分析。大多数 OR 基因(58.4%)被归类为平坦:在这个时间窗口内与水平线没有显著差异。有 32.8%的 OR 基因具有下降趋势,7.2%具有上升趋势,1.7%具有凸或凹趋势。但这些下降和上升的幅度往往很小:与 2 mo 相比,只有 4.3%的 OR 基因在 31 mo 时存在差异表达(DE)。有趣的是,个体 OR 基因的 NanoString 计数方差在年龄组之间是均匀的。我们对在严格控制条件下饲养和饲养的 C57BL6/N 小鼠的 15930 个 OR 基因表达数据进行的分析表明,MOE 水平的 OR 基因表达本质上是稳定的。