Landcare Research, Private Bag 92170, Auckland, New Zealand.
BMC Evol Biol. 2013 Sep 30;13:215. doi: 10.1186/1471-2148-13-215.
The glycolytic pathway is central to cellular energy production. Selection on individual enzymes within glycolysis, particularly phosphoglucose isomerase (Pgi), has been associated with metabolic performance in numerous organisms. Nonetheless, how whole energy-producing pathways evolve to allow organisms to thrive in different environments and adopt new lifestyles remains little explored. The Lanceocercata radiation of Australasian stick insects includes transitions from tropical to temperate climates, lowland to alpine habitats, and winged to wingless forms. This permits a broad investigation to determine which steps within glycolysis and what sites within enzymes are the targets of positive selection. To address these questions we obtained transcript sequences from seven core glycolysis enzymes, including two Pgi paralogues, from 29 Lanceocercata species.
Using maximum likelihood methods a signature of positive selection was inferred in two core glycolysis enzymes. Pgi and Glyceraldehyde 3-phosphate dehydrogenase (Gaphd) genes both encode enzymes linking glycolysis to the pentose phosphate pathway. Positive selection among Pgi paralogues and orthologues predominately targets amino acids with residues exposed to the protein's surface, where changes in physical properties may alter enzyme performance.
Our results suggest that, for Lancerocercata stick insects, adaptation to new stressful lifestyles requires a balance between maintaining cellular energy production, efficiently exploiting different energy storage pools and compensating for stress-induced oxidative damage.
糖酵解途径是细胞能量产生的核心。糖酵解过程中个别酶的选择,特别是磷酸葡萄糖异构酶(Pgi),与许多生物的代谢性能有关。尽管如此,整个能量产生途径是如何进化的,使生物体能够在不同的环境中茁壮成长并采用新的生活方式,这仍然很少被探索。澳大拉西亚竹节虫的 Lanceocercata 辐射包括从热带到温带气候、从低地到高山栖息地、从有翅到无翅形式的转变。这使得我们可以广泛地调查糖酵解过程中的哪些步骤以及酶中的哪些位点是正选择的目标。为了解决这些问题,我们从 29 种 Lanceocercata 物种中获得了包括两个 Pgi 基因在内的 7 种核心糖酵解酶的转录序列。
我们使用最大似然法推断出两种核心糖酵解酶中存在正选择的特征。磷酸葡萄糖异构酶(Pgi)和甘油醛-3-磷酸脱氢酶(Gaphd)基因都编码将糖酵解与戊糖磷酸途径连接的酶。Pgi 基因的正选择主要针对暴露在蛋白质表面的残基的氨基酸,这些残基的物理性质的变化可能改变酶的性能。
我们的研究结果表明,对于 Lanceocercata 竹节虫来说,适应新的有压力的生活方式需要在维持细胞能量产生、有效地利用不同的能量储存池和补偿应激诱导的氧化损伤之间取得平衡。