URMITE UM63, CNRS 7278, IRD 198, INSERM 1095, Aix-Marseille Université, Marseille, France.
Intervirology. 2013;56(6):386-94. doi: 10.1159/000354560. Epub 2013 Oct 17.
Giant viruses and amoebae are common in freshwater, where they can coexist with various insects. We screened insect larvae to detect giant viruses using a high-throughput method.
We analyzed 86 Eristalis tenax larvae obtained from stagnant water reservoirs in Tunisia. The larvae were decontaminated and then dissected to remove internal parts for coculture with Acanthamoeba polyphaga. Genome sequencing of isolated viruses was performed on a 454 Roche instrument, and comparative genomics were performed.
One Marseillevirus, named Insectomime virus, was isolated. The genome assembly generated two scaffolds, which were 382,776 and 3,855 bp in length. Among the 477 identified predicted proteins, the best hit for 435 of the identified proteins was a Marseillevirus or Lausannevirus protein. Tunisvirus was the most closely related to Insectomime, with 446 orthologs. One Insectomime protein shared with Lausannevirus and Tunisvirus showed the highest similarity with a protein from an aphid.
The isolation of a Marseillevirus from an insect expands the diversity of environments in which giant viruses have been isolated. The coexistence of larvae and giant viruses in stagnant water may explain the presence of the giant virus in the larva internal structures. This study illustrates the putative role of amoeba in lateral gene transfer not only between the organisms it phagocytoses, but also between organisms living in the same environment. © 2013 S. Karger AG, Basel.
巨型病毒和变形虫在淡水中很常见,它们可以与各种昆虫共存。我们使用高通量方法筛选昆虫幼虫来检测巨型病毒。
我们分析了来自突尼斯静止水库的 86 只 Eristalis tenax 幼虫。对幼虫进行去污处理,然后进行解剖,以去除内部部分用于与 Acanthamoeba polyphaga 共培养。使用 454 Roche 仪器对分离的病毒进行基因组测序,并进行比较基因组学分析。
分离出一种名为 Insectomime 病毒的马赛病毒。基因组组装生成了两个支架,长度分别为 382776 和 3855bp。在鉴定的 477 个预测蛋白中,435 个鉴定蛋白的最佳匹配是马赛病毒或 Lausannevirus 蛋白。Tunisvirus 与 Insectomime 最为密切相关,有 446 个直系同源物。与 Lausannevirus 和 Tunisvirus 共享的一种 Insectomime 蛋白与一种蚜虫蛋白具有最高的相似性。
从昆虫中分离出一种马赛病毒扩展了巨型病毒已被分离的环境多样性。幼虫和巨型病毒在静止水中共存可能解释了巨型病毒存在于幼虫内部结构中的原因。本研究说明了变形虫不仅在其吞噬的生物体之间,而且在生活在同一环境中的生物体之间进行水平基因转移的可能作用。© 2013 S. Karger AG, Basel.