Institute of Physics, Polish Academy of Sciences, Warsaw, Poland.
PLoS One. 2013 Nov 18;8(11):e79151. doi: 10.1371/journal.pone.0079151. eCollection 2013.
By the virtual screening method we have screened out Dihydrochalcone as a top-lead for the Alzheimer's disease using the database of about 32364 natural compounds. The binding affinity of this ligand to amyloid beta (Aβ) fibril has been thoroughly studied by computer simulation and experiment. Using the Thioflavin T (ThT) assay we have obtained the inhibition constant IC50 μM. This result is in good agreement with the estimation of the binding free energy obtained by the molecular mechanic-Poisson Boltzmann surface area method and all-atom simulation with the force field CHARMM 27 and water model TIP3P. Cell viability assays indicated that Dihydrochalcone could effectively reduce the cytotoxicity induced by Aβ. Thus, both in silico and in vitro studies show that Dihydrochalcone is a potential drug for the Alzheimers disease.
通过虚拟筛选方法,我们使用约 32364 种天然化合物的数据库筛选出二氢查尔酮作为阿尔茨海默病的顶级先导化合物。该配体与淀粉样β(Aβ)纤维的结合亲和力已通过计算机模拟和实验进行了深入研究。使用硫代黄素 T(ThT)测定法,我们获得了抑制常数 IC50 μM。该结果与通过分子力学-泊松-玻尔兹曼表面积方法和使用 CHARMM 27 力场和 TIP3P 水模型的全原子模拟获得的结合自由能的估算值非常吻合。细胞活力测定表明,二氢查尔酮可有效降低 Aβ 诱导的细胞毒性。因此,体内和体外研究均表明二氢查尔酮是一种有潜力的阿尔茨海默病药物。