Rogers Angela J, McGeachie Michael, Baron Rebecca M, Gazourian Lee, Haspel Jeffrey A, Nakahira Kiichi, Fredenburgh Laura E, Hunninghake Gary M, Raby Benjamin A, Matthay Michael A, Otero Ronny M, Fowler Vance G, Rivers Emanuel P, Woods Christopher W, Kingsmore Stephen, Langley Ray J, Choi Augustine M K
Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America ; Division of Pulmonary and Critical Care Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America ; Division of Pulmonary and Critical Care Medicine, Stanford University, Stanford, California, United States of America.
Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America.
PLoS One. 2014 Jan 30;9(1):e87538. doi: 10.1371/journal.pone.0087538. eCollection 2014.
To identify metabolomic biomarkers predictive of Intensive Care Unit (ICU) mortality in adults.
Comprehensive metabolomic profiling of plasma at ICU admission to identify biomarkers associated with mortality has recently become feasible.
We performed metabolomic profiling of plasma from 90 ICU subjects enrolled in the BWH Registry of Critical Illness (RoCI). We tested individual metabolites and a Bayesian Network of metabolites for association with 28-day mortality, using logistic regression in R, and the CGBayesNets Package in MATLAB. Both individual metabolites and the network were tested for replication in an independent cohort of 149 adults enrolled in the Community Acquired Pneumonia and Sepsis Outcome Diagnostics (CAPSOD) study.
We tested variable metabolites for association with 28-day mortality. In RoCI, nearly one third of metabolites differed among ICU survivors versus those who died by day 28 (N = 57 metabolites, p<.05). Associations with 28-day mortality replicated for 31 of these metabolites (with p<.05) in the CAPSOD population. Replicating metabolites included lipids (N = 14), amino acids or amino acid breakdown products (N = 12), carbohydrates (N = 1), nucleotides (N = 3), and 1 peptide. Among 31 replicated metabolites, 25 were higher in subjects who progressed to die; all 6 metabolites that are lower in those who die are lipids. We used Bayesian modeling to form a metabolomic network of 7 metabolites associated with death (gamma-glutamylphenylalanine, gamma-glutamyltyrosine, 1-arachidonoylGPC(20:4), taurochenodeoxycholate, 3-(4-hydroxyphenyl) lactate, sucrose, kynurenine). This network achieved a 91% AUC predicting 28-day mortality in RoCI, and 74% of the AUC in CAPSOD (p<.001 in both populations).
Both individual metabolites and a metabolomic network were associated with 28-day mortality in two independent cohorts. Metabolomic profiling represents a valuable new approach for identifying novel biomarkers in critically ill patients.
确定可预测成人重症监护病房(ICU)死亡率的代谢组学生物标志物。
对ICU入院时的血浆进行全面代谢组分析以识别与死亡率相关的生物标志物,最近已变得可行。
我们对90名纳入布列根和妇女医院危重病登记处(RoCI)的ICU患者的血浆进行了代谢组分析。我们使用R中的逻辑回归以及MATLAB中的CGBayesNets软件包,测试了个体代谢物以及代谢物的贝叶斯网络与28天死亡率的关联。个体代谢物和网络均在纳入社区获得性肺炎和脓毒症结局诊断(CAPSOD)研究的149名成年人的独立队列中进行了重复测试。
我们测试了可变代谢物与28天死亡率的关联。在RoCI中,ICU幸存者与28天内死亡者之间近三分之一的代谢物存在差异(N = 57种代谢物,p<0.05)。在CAPSOD人群中,其中31种代谢物与28天死亡率的关联得到了重复(p<0.05)。重复的代谢物包括脂质(N = 14)、氨基酸或氨基酸分解产物(N = 12)、碳水化合物(N = 1)、核苷酸(N = 3)和1种肽。在31种重复的代谢物中,25种在进展至死亡的受试者中含量较高;在死亡者中含量较低的所有6种代谢物均为脂质。我们使用贝叶斯模型构建了一个由7种与死亡相关的代谢物组成的代谢组网络(γ-谷氨酰苯丙氨酸、γ-谷氨酰酪氨酸、1-花生四烯酰甘油磷脂酰胆碱(20:4)、牛磺鹅去氧胆酸、3-(4-羟基苯基)乳酸、蔗糖、犬尿氨酸)。该网络在RoCI中预测28天死亡率的AUC为91%,在CAPSOD中的AUC为74%(两个群体中p均<0.001)。
在两个独立队列中,个体代谢物和代谢组网络均与28天死亡率相关。代谢组分析是识别危重病患者新型生物标志物的一种有价值的新方法。