Department of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH 44106, USA.
Development. 2014 Mar;141(5):1129-39. doi: 10.1242/dev.102392.
Trithorax (TRX) antagonizes epigenetic silencing by Polycomb group (PcG) proteins, stimulates enhancer-dependent transcription, and establishes a 'cellular memory' of active transcription of PcG-regulated genes. The mechanisms underlying these TRX functions remain largely unknown, but are presumed to involve its histone H3K4 methyltransferase activity. We report that the SET domains of TRX and TRX-related (TRR) have robust histone H3K4 monomethyltransferase activity in vitro and that Tyr3701 of TRX and Tyr2404 of TRR prevent them from being trimethyltransferases. The trx(Z11) missense mutation (G3601S), which abolishes H3K4 methyltransferase activity in vitro, reduces the H3K4me1 but not the H3K4me3 level in vivo. trx(Z11) also suppresses the impaired silencing phenotypes of the Pc(3) mutant, suggesting that H3K4me1 is involved in antagonizing Polycomb silencing. Polycomb silencing is also antagonized by TRX-dependent H3K27 acetylation by CREB-binding protein (CBP). We show that perturbation of Polycomb silencing by TRX overexpression requires CBP. We also show that TRX and TRR are each physically associated with CBP in vivo, that TRX binds directly to the CBP KIX domain, and that the chromatin binding patterns of TRX and TRR are highly correlated with CBP and H3K4me1 genome-wide. In vitro acetylation of H3K27 by CBP is enhanced on K4me1-containing H3 substrates, and independently altering the H3K4me1 level in vivo, via the H3K4 demethylase LSD1, produces concordant changes in H3K27ac. These data indicate that the catalytic activities of TRX and CBP are physically coupled and suggest that both activities play roles in antagonizing Polycomb silencing, stimulating enhancer activity and cellular memory.
三结构域蛋白(TRX)拮抗多梳蛋白组(PcG)蛋白的表观遗传沉默,刺激增强子依赖性转录,并建立 PcG 调控基因转录的“细胞记忆”。这些 TRX 功能的机制在很大程度上仍然未知,但据推测涉及它的组蛋白 H3K4 甲基转移酶活性。我们报告说,TRX 和 TRX 相关(TRR)的 SET 结构域在体外具有强大的组蛋白 H3K4 单甲基转移酶活性,而 TRX 的 Tyr3701 和 TRR 的 Tyr2404 阻止它们成为三甲基转移酶。体外丧失 H3K4 甲基转移酶活性的 trx(Z11) 错义突变(G3601S),降低了体内 H3K4me1 但不降低 H3K4me3 水平。trx(Z11) 还抑制了 Pc(3) 突变体的沉默表型缺陷,表明 H3K4me1 参与拮抗多梳沉默。多梳沉默也被 CREB 结合蛋白(CBP)依赖的 TRX 介导的 H3K27 乙酰化拮抗。我们表明,TRX 过表达对多梳沉默的干扰需要 CBP。我们还表明,TRX 和 TRR 在体内都与 CBP 物理相关,TRX 直接与 CBP 的 KIX 结构域结合,并且 TRX 和 TRR 的染色质结合模式与 CBP 和 H3K4me1 基因组高度相关。CBP 体外对 H3K27 的乙酰化作用在含有 K4me1 的 H3 底物上增强,并且通过 H3K4 去甲基酶 LSD1 独立地改变体内的 H3K4me1 水平,导致 H3K27ac 产生一致的变化。这些数据表明 TRX 和 CBP 的催化活性在物理上是偶联的,并表明这两种活性都在拮抗多梳沉默、刺激增强子活性和细胞记忆中发挥作用。