Glass-Kaastra Shiona K, Pearl David L, Reid-Smith Richard J, McEwen Beverly, Slavic Durda, McEwen Scott A, Fairles Jim
Department of Population Medicine (Glass-Kaastra, Pearl, Reid-Smith, S. McEwen), Department of Pathobiology (Reid-Smith), and Animal Health Laboratory (B. McEwen, Slavic, Fairles), University of Guelph, Guelph, Ontario N1G 2W1; Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, 160 Research Lane, Guelph, Ontario N1G B52 (Reid-Smith).
Can Vet J. 2014 Apr;55(4):341-8.
Antimicrobial susceptibility data on Escherichia coli F4, Pasteurella multocida, and Streptococcus suis isolates from Ontario swine (January 1998 to October 2010) were acquired from a comprehensive diagnostic veterinary laboratory in Ontario, Canada. In relation to the possible development of a surveillance system for antimicrobial resistance, data were assessed for ease of management, completeness, consistency, and applicability for temporal and spatial statistical analyses. Limited farm location data precluded spatial analyses and missing demographic data limited their use as predictors within multivariable statistical models. Changes in the standard panel of antimicrobials used for susceptibility testing reduced the number of antimicrobials available for temporal analyses. Data consistency and quality could improve over time in this and similar diagnostic laboratory settings by encouraging complete reporting with sample submission and by modifying database systems to limit free-text data entry. These changes could make more statistical methods available for disease surveillance and cluster detection.
从加拿大安大略省一家综合性诊断兽医实验室获取了1998年1月至2010年10月期间安大略省猪源大肠杆菌F4、多杀性巴氏杆菌和猪链球菌分离株的药敏数据。关于抗菌药物耐药性监测系统的可能发展,对数据进行了评估,以确定其管理的简易程度、完整性、一致性以及在时间和空间统计分析中的适用性。有限的农场位置数据妨碍了空间分析,而缺失的人口统计数据限制了它们在多变量统计模型中作为预测因子的使用。用于药敏试验的标准抗菌药物面板的变化减少了可用于时间分析的抗菌药物数量。通过鼓励在提交样本时完整报告,并修改数据库系统以限制自由文本数据录入,在这个以及类似的诊断实验室环境中,数据的一致性和质量可能会随着时间的推移而提高。这些变化可以使更多的统计方法可用于疾病监测和聚集性检测。