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直接法在蛋白质晶体学中用于处理低至5埃分辨率衍射数据的应用。

Applications of direct methods in protein crystallography for dealing with diffraction data down to 5 Å resolution.

作者信息

Fan Haifu, Gu Yuanxin, He Yao, Lin Zhengjiong, Wang Jiawei, Yao Deqiang, Zhang Tao

机构信息

Institute of Physics, Chinese Academy of Sciences, Beijing, 100190, People's Republic of China.

Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, People's Republic of China.

出版信息

Acta Crystallogr A Found Adv. 2014 May;70(Pt 3):239-47. doi: 10.1107/S2053273313034864. Epub 2014 Mar 12.

Abstract

Apart from solving the heavy-atom substructure in proteins and ab initio phasing of protein diffraction data at atomic resolution, direct methods have also been successfully combined with other protein crystallographic methods in dealing with diffraction data far below atomic resolution, leading to significantly improved results. In this respect, direct methods provide phase constraints in reciprocal space within a dual-space iterative framework rather than solve the phase problem independently. Applications of this type of direct methods to difficult SAD phasing, model completion and low-resolution phase extension will be described in detail.

摘要

除了解决蛋白质中的重原子子结构以及在原子分辨率下对蛋白质衍射数据进行从头相位测定外,直接法还成功地与其他蛋白质晶体学方法相结合,用于处理远低于原子分辨率的衍射数据,从而显著改善了结果。在这方面,直接法在双空间迭代框架内提供倒易空间中的相位约束,而不是独立解决相位问题。将详细描述这类直接法在困难的单波长反常散射(SAD)相位测定、模型完善和低分辨率相位扩展中的应用。

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