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辐射后结肠隐窝时空细胞动力学的数学建模

Mathematical modelling of spatio-temporal cell dynamics in colonic crypts following irradiation.

作者信息

Murano T, Kagawa Y, Tsuneda S

机构信息

Department of Life Science and Medical Bioscience, Waseda University, Tokyo, Japan.

出版信息

Cell Prolif. 2014 Aug;47(4):347-55. doi: 10.1111/cpr.12110. Epub 2014 May 14.

DOI:10.1111/cpr.12110
PMID:24828339
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6496481/
Abstract

OBJECTIVES

Modelling the apoptotic process is essential for simulating and understanding tumour growth, as most tumour tissues carry mutations in apoptotic signalling pathways. Thus here, we have aimed to construct a mathematical model of colonic crypts that explicitly incorporates the apoptotic mechanism.

METHODS

A murine colonic crypt was described as being a two-dimensional rectangular surface model. In this system, three types of cells with different proliferating and differentiating potentials migrate. Apoptosis was described as a process activated by irradiation that progresses in a stepwise manner. Parameter values in the model were determined to be consistent with experimental data for changes in the apoptotic cell ratio within murine transverse colonic crypts following irradiation.

RESULTS

First, we constructed a model reproducing cell proliferation dynamics in normal murine colonic crypts; next, we applied the apoptotic mechanism to this model. As a result, we succeeded in simultaneous reproduction of both spatial and temporal changes in distribution of apoptotic cells in murine colonic crypts by determining parameter values in numerical simulations. Through this adjustment process, we were able to predict that stem cells and transit amplifying (TA) cells in each generation must react distinctly from each other, to apoptosis-inducing stimuli.

CONCLUSIONS

We constructed a mathematical model with which we could quantitatively describe cell proliferative and apoptotic dynamics in a murine colonic crypt. Using this model, we were able to make novel predictions that sensitivity to apoptosis-inducing stimuli is dependent on cell type.

摘要

目的

由于大多数肿瘤组织在凋亡信号通路中存在突变,因此对凋亡过程进行建模对于模拟和理解肿瘤生长至关重要。因此,在此我们旨在构建一个明确纳入凋亡机制的结肠隐窝数学模型。

方法

将小鼠结肠隐窝描述为二维矩形表面模型。在该系统中,三种具有不同增殖和分化潜能的细胞迁移。凋亡被描述为一个由辐射激活并逐步进展的过程。模型中的参数值被确定为与小鼠横结肠隐窝照射后凋亡细胞比例变化的实验数据一致。

结果

首先,我们构建了一个再现正常小鼠结肠隐窝细胞增殖动力学的模型;接下来,我们将凋亡机制应用于该模型。结果,通过在数值模拟中确定参数值,我们成功地同时再现了小鼠结肠隐窝中凋亡细胞分布的空间和时间变化。通过这个调整过程,我们能够预测每一代的干细胞和过渡增殖(TA)细胞对凋亡诱导刺激的反应必须彼此不同。

结论

我们构建了一个数学模型,利用该模型我们可以定量描述小鼠结肠隐窝中的细胞增殖和凋亡动力学。使用这个模型,我们能够做出新的预测,即对凋亡诱导刺激的敏感性取决于细胞类型。

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本文引用的文献

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Modeling of stem cell dynamics in human colonic crypts in silico.基于计算机的人类结肠隐窝中干细胞动力学建模。
J Gastroenterol. 2014 Feb;49(2):263-9. doi: 10.1007/s00535-013-0887-x.
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Bayesian inference supports a location and neighbour-dependent model of DNA methylation propagation at the MGMT gene promoter in lung tumours.贝叶斯推理支持肺癌中MGMT基因启动子处DNA甲基化传播的位置和邻域依赖性模型。
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Lgr5 intestinal stem cells have high telomerase activity and randomly segregate their chromosomes.Lgr5 肠道干细胞具有较高的端粒酶活性,并随机分离其染色体。
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A comprehensive model of the spatio-temporal stem cell and tissue organisation in the intestinal crypt.肠道隐窝中时空干细胞和组织构成的综合模型。
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