Shimada Yasuhito, Nishimura Yuhei, Tanaka Toshio
Department of Molecular and Cellular Pharmacology, Pharmacogenomics and Pharmacoinformatics, Mie University Graduate School of Medicine, 2-174 Edobashi, Tsu, Mie, 514-8507, Japan.
Methods Mol Biol. 2014;1165:223-38. doi: 10.1007/978-1-4939-0856-1_15.
Because of their small size, high fecundity, and commonality to human genetics and genomics, phenotype-based animal testing using zebrafish (Danio rerio) has emerged as a powerful tool for identifying disease mechanisms, drug target molecules and small bioactive compounds over the last decade. Importantly, the immaturity of the zebrafish larvae immune system compared with that of mammals facilitates the implantation of human tumors representing aggressive cancer progression with metastasis. In the current chapter, we describe the methods for human cancer cell xenotransplantation into zebrafish, phenotypic image analysis, and transcriptome analysis using deep sequencing.
由于斑马鱼(Danio rerio)体型小、繁殖力高,且在人类遗传学和基因组学方面具有共性,在过去十年中,基于表型的斑马鱼动物试验已成为识别疾病机制、药物靶标分子和生物活性小分子化合物的有力工具。重要的是,与哺乳动物相比,斑马鱼幼体免疫系统不成熟,这便于植入代表具有转移能力的侵袭性癌症进展的人类肿瘤。在本章中,我们描述了将人类癌细胞异种移植到斑马鱼体内、表型图像分析以及使用深度测序进行转录组分析的方法。