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连接信息孤岛,以建立一个关于感兴趣的药物和健康结果的综合知识库。

Bridging islands of information to establish an integrated knowledge base of drugs and health outcomes of interest.

作者信息

Boyce Richard D, Ryan Patrick B, Norén G Niklas, Schuemie Martijn J, Reich Christian, Duke Jon, Tatonetti Nicholas P, Trifirò Gianluca, Harpaz Rave, Overhage J Marc, Hartzema Abraham G, Khayter Mark, Voss Erica A, Lambert Christophe G, Huser Vojtech, Dumontier Michel

机构信息

University of Pittsburgh, Pittsburgh, PA, USA,

出版信息

Drug Saf. 2014 Aug;37(8):557-67. doi: 10.1007/s40264-014-0189-0.

Abstract

The entire drug safety enterprise has a need to search, retrieve, evaluate, and synthesize scientific evidence more efficiently. This discovery and synthesis process would be greatly accelerated through access to a common framework that brings all relevant information sources together within a standardized structure. This presents an opportunity to establish an open-source community effort to develop a global knowledge base, one that brings together and standardizes all available information for all drugs and all health outcomes of interest (HOIs) from all electronic sources pertinent to drug safety. To make this vision a reality, we have established a workgroup within the Observational Health Data Sciences and Informatics (OHDSI, http://ohdsi.org) collaborative. The workgroup's mission is to develop an open-source standardized knowledge base for the effects of medical products and an efficient procedure for maintaining and expanding it. The knowledge base will make it simpler for practitioners to access, retrieve, and synthesize evidence so that they can reach a rigorous and accurate assessment of causal relationships between a given drug and HOI. Development of the knowledge base will proceed with the measureable goal of supporting an efficient and thorough evidence-based assessment of the effects of 1,000 active ingredients across 100 HOIs. This non-trivial task will result in a high-quality and generally applicable drug safety knowledge base. It will also yield a reference standard of drug-HOI pairs that will enable more advanced methodological research that empirically evaluates the performance of drug safety analysis methods.

摘要

整个药物安全领域都需要更高效地搜索、检索、评估和综合科学证据。通过访问一个通用框架,将所有相关信息源整合在一个标准化结构中,这一发现和综合过程将大大加速。这为建立一个开源社区项目提供了契机,以开发一个全球知识库,该知识库汇集并标准化来自所有与药物安全相关的电子来源的所有药物及所有感兴趣的健康结果(HOIs)的所有可用信息。为了实现这一愿景,我们在观察性健康数据科学与信息学(OHDSI,http://ohdsi.org)协作项目中成立了一个工作组。该工作组的任务是开发一个关于医疗产品效果的开源标准化知识库,以及一个维护和扩展该知识库的有效程序。该知识库将使从业者更容易获取、检索和综合证据,从而能够对特定药物与健康结果之间的因果关系进行严谨而准确的评估。知识库的开发将以支持对100种健康结果中1000种活性成分的效果进行高效且全面的循证评估这一可衡量目标来推进。这项艰巨的任务将产生一个高质量且普遍适用的药物安全知识库。它还将产生一个药物 - 健康结果对的参考标准,这将有助于开展更先进的方法学研究,以实证方式评估药物安全分析方法的性能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44e4/4134480/6db530767fa1/40264_2014_189_Fig1_HTML.jpg

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