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THOC5通过与聚腺苷酸化特异性因子100(CPSF100)相互作用来控制立即早期基因的3'末端加工。

THOC5 controls 3'end-processing of immediate early genes via interaction with polyadenylation specific factor 100 (CPSF100).

作者信息

Tran Doan Duy Hai, Saran Shashank, Williamson Andrew J K, Pierce Andrew, Dittrich-Breiholz Oliver, Wiehlmann Lutz, Koch Alexandra, Whetton Anthony D, Tamura Teruko

机构信息

Institut fuer Biochemie, OE4310, Medizinische Hochschule Hannover, Carl-Neuberg-Strasse 1, D-30623 Hannover, Germany.

Stem Cell and Leukaemia Proteomics Laboratory, The University of Manchester, Manchester Academic Health Science Centre, 27 Palatine Road, Withington Manchester, M20 3LJ UK.

出版信息

Nucleic Acids Res. 2014 Oct 29;42(19):12249-60. doi: 10.1093/nar/gku911. Epub 2014 Oct 1.

Abstract

Transcription of immediate early genes (IEGs) in response to extrinsic and intrinsic signals is tightly regulated at multiple stages. It is known that untranslated regions of the RNA can play a role in these processes. Here we show that THOC5, a member of the TREX (transcription/export) complex, plays a role in expression of only a subset of constitutively active genes, however transcriptome analysis reveals that more than 90% of IEG were not induced by serum in THOC5 depleted cells. Furthermore, THOC5 depletion does not influence the expression of the most rapidly induced IEGs, e.g. Fos and Jun. One group of THOC5 target genes, including Id1, Id3 and Wnt11 transcripts, were not released from chromatin in THOC5 depleted cells. Genes in another group, including Myc and Smad7 transcripts, were released with shortening of 3'UTR by alternative cleavage, and were spliced but export was impaired in THOC5 depleted cells. By interactome analysis using THOC5 as bait, we show that upon stimulation with serum THOC5 forms a complex with polyadenylation-specific factor 100 (CPSF100). THOC5 is required for recruitment of CPSF100 to 3'UTR of THOC5 target genes. These data suggest the presence of a novel mechanism for the control of IEG response by THOC5 via 3'end-processing.

摘要

立即早期基因(IEGs)对外源和内源信号的转录在多个阶段受到严格调控。已知RNA的非翻译区在这些过程中发挥作用。在此我们表明,TREX(转录/输出)复合体成员THOC5仅在组成型活性基因的一个子集中发挥表达作用,然而转录组分析显示,在THOC5缺失的细胞中,超过90%的IEG未被血清诱导。此外,THOC5缺失并不影响最快速诱导的IEG(如Fos和Jun)的表达。一组THOC5靶基因,包括Id1、Id3和Wnt11转录本,在THOC5缺失的细胞中未从染色质上释放。另一组基因,包括Myc和Smad7转录本,通过可变切割以3'UTR缩短的形式释放,并进行了剪接,但在THOC5缺失的细胞中输出受损。通过以THOC5为诱饵进行相互作用组分析,我们表明在血清刺激下,THOC5与聚腺苷酸化特异性因子100(CPSF100)形成复合体。THOC5是将CPSF100募集到THOC5靶基因3'UTR所必需的。这些数据表明存在一种新的机制,通过3'末端加工,THOC5可控制IEG反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a807/4231767/0efbbc77d0c2/gku911fig1.jpg

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