Zhang Hao, Cheng Ming-Gen, Sun Bin, Guo Su-Hui, Song Man, Li Qiang, Huang Xing
Key Laboratory of Microbiology of Agricultural Environment, Ministry of Agriculture, College of life sciences, Nanjing Agricultural University, Nanjing, 210095, PR China.
Int J Syst Evol Microbiol. 2015 Feb;65(Pt 2):370-374. doi: 10.1099/ijs.0.068932-0. Epub 2014 Oct 31.
A Gram-stain-negative bacterium, designated XIN-1(T), was isolated from a farmland river sludge sample in Suzhou, China. Cells of strain XIN-1(T) were strictly aerobic, non-motile and rod-shaped. Strain XIN-1(T) grew optimally at pH 7.0 and 28 °C. Phylogenetic analysis of the 16S rRNA gene sequences showed that strain XIN-1(T) was most closely related to Flavobacterium hauense BX12(T) (98.2 % sequence similarity), followed by Flavobacterium beibuense F44-8(T) (96.3 %). The major respiratory quinone was menaquinone-6 and the major polar lipid was phosphatidylethanolamine. The major fatty acids (>5 %) were summed feature 3 (comprising C16 : 1ω7c and/or C16 : 1ω6c), summed feature 4 (comprising iso-C17 : 1 I and/or anteiso-C17 : 1 B), iso-C15 : 0, C16 : 0 and iso-C17 : 0 3-OH. The genomic DNA G+C content of strain XIN-1(T) was 39.8 mol%. Strain XIN-1(T) showed low DNA-DNA relatedness with F. hauense BX12(T) (38.7±0.5 %). On the basis of genotypic and phenotypic data, strain XIN-1(T) is considered to represent a novel species of the genus Flavobacterium, for which the name Flavobacterium suzhouense sp. nov. is proposed. The type strain is XIN-1(T) ( = CCTCC AB 2014200(T) = KCTC 42107(T)).
从中国苏州的农田河流污泥样本中分离出一株革兰氏阴性菌,命名为XIN-1(T)。XIN-1(T)菌株的细胞为严格需氧、无运动性的杆状。XIN-1(T)菌株在pH 7.0和28℃条件下生长最佳。基于16S rRNA基因序列的系统发育分析表明,XIN-1(T)菌株与哈氏黄杆菌BX12(T)(序列相似性为98.2%)关系最为密切,其次是北部湾黄杆菌F44-8(T)(96.3%)。主要呼吸醌为甲基萘醌-6,主要极性脂为磷脂酰乙醇胺。主要脂肪酸(>5%)为特征性总和3(包含C16 : 1ω7c和/或C16 : 1ω6c)、特征性总和4(包含异-C17 : 1 I和/或anteiso-C17 : 1 B)、异-C15 : 0、C16 : 0和异-C17 : 0 3-OH。XIN-1(T)菌株的基因组DNA G+C含量为39.8 mol%。XIN-1(T)菌株与哈氏黄杆菌BX12(T)的DNA-DNA相关性较低(38.7±0.5%)。基于基因型和表型数据,XIN-1(T)菌株被认为代表黄杆菌属的一个新物种,为此提出新名称苏州黄杆菌(Flavobacterium suzhouense sp. nov.)。模式菌株为XIN-1(T)(= CCTCC AB 2014200(T)= KCTC 42107(T))。