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模式藤壶纹藤壶(Balanus balanus Linnaeus,1758)(甲壳纲:颚足纲:无柄目)线粒体基因组及藤壶科内的基因重排

The model barnacle Balanus balanus Linnaeus, 1758 (Crustacea: Maxillopoda: Sessilia) mitochondrial genome and gene rearrangements within the family Balanidae.

作者信息

Shen Xin, Tsoi Kwok-Ho, Cheang Chi-Chiu

机构信息

a Jiangsu Key Laboratory of Marine Biotechnology/College of Marine Science/Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Huaihai Institute of Technology , Lianyungang , China and.

b Department of Science and Environmental Studies , the Hong Kong Institute of Education , Taipo , Hong Kong , China.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):2112-4. doi: 10.3109/19401736.2014.982581. Epub 2014 Nov 18.

Abstract

Balanus balanus Linnaeus, 1758, the model organism in the order Sessilia (Crustacea: Maxillopoda) is a cold water acorn barnacle in the family Balanidae distributing over the entire northern hemisphere. We present complete mitochondrial genome of this barnacle and analyze mitochondrial genomic characters of the family Balanidae. The length of mitochondrial genome is 15,955 bp, which is larger than those of the other barnacles in the same family. An inversion of a six-gene block (trnPro- nad4L- nad4- trnHis- nad5- trnPhe) is found between B. balanus and two Megabalanus (M. ajax and M. volcano). Three types of mitochondrial gene arrangements revealed in Balanidae have indicated the non-conserved gene orders even at intrafamilial level. Compared to pancrustacean ground pattern, large-scale gene rearrangements are found in B. balanus. Translocations of at least six tRNAs (trnAla, trnGlu/trnSer(AGY), trnPro/trnThr, trnLys, trnGln and trnCys) are identified and translocation and inversion occurred simultaneously in one tRNAs (trnTyr).

摘要

藤壶属的纹藤壶(Balanus balanus Linnaeus,1758)是固着亚目(甲壳纲:颚足纲)的模式生物,是藤壶科的一种冷水藤壶,分布于整个北半球。我们展示了这种藤壶的完整线粒体基因组,并分析了藤壶科的线粒体基因组特征。线粒体基因组长度为15,955 bp,比同科的其他藤壶的线粒体基因组长度更长。在纹藤壶与两种巨藤壶(Ajax巨藤壶和火山巨藤壶)之间发现了一个六基因块(trnPro - nad4L - nad4 - trnHis - nad5 - trnPhe)的倒位。藤壶科中揭示的三种线粒体基因排列方式表明,即使在科内水平,基因顺序也不保守。与泛甲壳动物的基本模式相比,在纹藤壶中发现了大规模的基因重排。鉴定出至少六种tRNA(trnAla、trnGlu/trnSer(AGY)、trnPro/trnThr、trnLys、trnGln和trnCys)发生了易位,并且在一个tRNA(trnTyr)中同时发生了易位和倒位。

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