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基于相机的三维实时粒子跟踪,速率达千赫兹,精度达埃。

Camera-based three-dimensional real-time particle tracking at kHz rates and Ångström accuracy.

作者信息

Huhle Alexander, Klaue Daniel, Brutzer Hergen, Daldrop Peter, Joo Sihwa, Otto Oliver, Keyser Ulrich F, Seidel Ralf

机构信息

Biotechnology Center, Technische Universität Dresden, Dresden, 01062, Germany.

Institute for Molecular Cell Biology, Westfälische Wilhelms-Universität Münster, 48149 Münster, Germany.

出版信息

Nat Commun. 2015 Jan 7;6:5885. doi: 10.1038/ncomms6885.

Abstract

Optical and magnetic tweezers are widely employed to probe the mechanics and activity of individual biomolecular complexes. They rely on micrometre-sized particles to detect molecular conformational changes from the particle position. Real-time particle tracking with Ångström accuracy has so far been only achieved using laser detection through photodiodes. Here we demonstrate that camera-based imaging can provide a similar performance for all three dimensions. Particle imaging at kHz rates is combined, with real-time data processing being accelerated by a graphics-processing unit. For particles that are fixed in the sample cell we can detect 3-Å-sized steps that are introduced by cell translations at rates of 10 Hz, while for DNA-tethered particles 5 Å steps at 1 Hz can be resolved. Moreover, 20 particles can be tracked in parallel with comparable accuracy. Our approach provides a simple and robust way for high-resolution tweezer experiments using multiple particles at a time.

摘要

光学镊子和磁镊被广泛用于探测单个生物分子复合物的力学特性和活性。它们依靠微米级大小的粒子,通过粒子位置来检测分子构象变化。迄今为止,只有通过光电二极管进行激光检测才能实现具有埃级精度的实时粒子跟踪。在此,我们证明基于相机的成像在所有三个维度上都能提供类似的性能。以千赫兹速率进行粒子成像,并通过图形处理单元加速实时数据处理。对于固定在样品池中的粒子,我们能够检测到由细胞平移以10赫兹速率引入的3埃大小的步移,而对于DNA束缚的粒子,1赫兹时5埃的步移也能够分辨出来。此外,能够以相当的精度同时并行跟踪20个粒子。我们的方法为一次使用多个粒子进行高分辨率镊子实验提供了一种简单且稳健的方式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a5b/4338538/949febf97b4f/emss-61106-f0001.jpg

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