Afsarian Mohammad H, Badali Hamid, Boekhout Teun, Shokohi Tahereh, Katiraee Farzad
Department of Microbiology, Fasa University of Medical Sciences, Fasa, Iran.
Department of Medical Mycology and Parasitology/Invasive Fungi Research Center (IFRC), School of Medicine, Mazandaran University of Medical Sciences, Sari, Iran.
J Med Microbiol. 2015 Mar;64(Pt 3):248-253. doi: 10.1099/jmm.0.000015. Epub 2015 Jan 16.
Burn intensive care unit (BICU) patients are specifically exposed to deep-seated nosocomial infections due to Candida albicans. Superficial carriage of C. albicans is a potential source of infection and dissemination, and typing methods could be useful to trace the different isolates. Multilocus sequence typing is a powerful genotyping method for pathogenic micro-organisms, including Candida albicans. Thirty clinical isolates of C. albicans obtained from 22 patients that were admitted to the BICU from a burn hospital at Sari, Mazandaran state, Iran, were studied epidemiologically by multilocus sequence typing (MLST). Seventy-five variable nucleotide sites were found. Sixty-two alleles were identified among the seven loci of the C. albicans isolates and one new allele was obtained. Eighteen diploid sequence types (DSTs) were identified, and among those 10 were new. These isolates belonged to nine clonal clusters (CCs) while two isolates occurred as singletons. Eleven (36.7 %) isolates belonged to CC 124 after eBURST analysis and 13 isolates (43.3 %) were assigned to clade 4. Approximately 17 % of the 30 isolates belonged to clade 1 (CC 69 and CC 766). Isolates from several patients with burns were found to be related genetically. Some patients yielded multiple isolates with identical DSTs, suggesting colonization or infection caused by cross-contamination between patients. Isolates that show identical or similar allelic profiles are presumed to be identical or closely related and may be used to evaluate the genetic relationships between isolates from a specific environment such as the BICU.
烧伤重症监护病房(BICU)的患者特别容易受到白色念珠菌引起的深部医院感染。白色念珠菌的表面定植是感染和传播的潜在来源,分型方法可能有助于追踪不同的分离株。多位点序列分型是一种用于包括白色念珠菌在内的致病微生物的强大基因分型方法。对从伊朗马赞德兰省萨里市一家烧伤医院收治到BICU的22例患者中获得的30株白色念珠菌临床分离株进行了多位点序列分型(MLST)的流行病学研究。发现了75个可变核苷酸位点。在白色念珠菌分离株的7个基因座中鉴定出62个等位基因,并获得了1个新等位基因。鉴定出18种二倍体序列类型(DST),其中10种是新的。这些分离株属于9个克隆簇(CC),而有2个分离株单独出现。经eBURST分析后,11株(36.7%)分离株属于CC 124,13株(43.3%)分离株被归入进化枝4。30株分离株中约17%属于进化枝1(CC 69和CC 766)。发现几名烧伤患者的分离株在基因上相关。一些患者产生了具有相同DST的多个分离株,表明患者之间的交叉污染导致了定植或感染。显示相同或相似等位基因谱的分离株被认为是相同或密切相关的,可用于评估来自特定环境(如BICU)的分离株之间的遗传关系。