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转录中丢失:信息传递中的瞬时错误。

Lost in transcription: transient errors in information transfer.

作者信息

Gordon Alasdair J E, Satory Dominik, Halliday Jennifer A, Herman Christophe

机构信息

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX 77030, USA; Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, TX 77030, USA.

出版信息

Curr Opin Microbiol. 2015 Apr;24:80-7. doi: 10.1016/j.mib.2015.01.010. Epub 2015 Jan 28.

Abstract

Errors in information transfer from DNA to RNA to protein are inevitable. Here, we focus on errors that occur in nascent transcripts during transcription, epimutations. Recent approaches using novel cDNA library preparation and next-generation sequencing begin to directly determine the rate of epimutation and allow analysis of the epimutational spectrum of transcription errors, the type and sequence context of the errors produced in a transcript by an RNA polymerase. The phenotypic consequences of transcription errors have been assessed using both forward and reverse epimutation systems. These studies reveal that transient transcription errors can produce a modification of cell phenotype, partial phenotypic suppression of a mutant allele, and a heritable change in cell phenotype, epigenetic switching in a bistable gene network.

摘要

从DNA到RNA再到蛋白质的信息传递过程中,错误是不可避免的。在这里,我们关注转录过程中新生转录本中发生的错误,即表观突变。最近使用新型cDNA文库制备和下一代测序的方法开始直接确定表观突变率,并允许分析转录错误的表观突变谱,即RNA聚合酶在转录本中产生的错误的类型和序列背景。已经使用正向和反向表观突变系统评估了转录错误的表型后果。这些研究表明,瞬时转录错误可以导致细胞表型的改变、突变等位基因的部分表型抑制以及细胞表型的可遗传变化,即双稳态基因网络中的表观遗传转换。

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