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基于蛋白质组学的方法,以深入了解在早期时间窗口内暴露于杜氏利什曼原虫的THP-1细胞的重编程。

Proteomic-based approach to gain insight into reprogramming of THP-1 cells exposed to Leishmania donovani over an early temporal window.

作者信息

Singh Alok Kumar, Pandey Rajeev Kumar, Siqueira-Neto Jair Lage, Kwon Yong-Jun, Freitas-Junior Lucio H, Shaha Chandrima, Madhubala Rentala

机构信息

School of Life Sciences, Jawaharlal Nehru University, New Delhi, India.

Cell Death and Differentiation Research Laboratory, National Institute of Immunology, New Delhi, India.

出版信息

Infect Immun. 2015 May;83(5):1853-68. doi: 10.1128/IAI.02833-14. Epub 2015 Feb 17.

Abstract

Leishmania donovani, a protozoan parasite, is the causative agent of visceral leishmaniasis. It lives and multiplies within the harsh environment of macrophages. In order to investigate how intracellular parasite manipulate the host cell environment, we undertook a quantitative proteomic study of human monocyte-derived macrophages (THP-1) following infection with L. donovani. We used the isobaric tags for relative and absolute quantification (iTRAQ) method and liquid chromatography-tandem mass spectrometry (LC-MS/MS) to compare expression profiles of noninfected and L. donovani-infected THP-1 cells. We detected modifications of protein expression in key metabolic pathways, including glycolysis and fatty acid oxidation, suggesting a global reprogramming of cell metabolism by the parasite. An increased abundance of proteins involved in gene transcription, RNA splicing (heterogeneous nuclear ribonucleoproteins [hnRNPs]), histones, and DNA repair and replication was observed at 24 h postinfection. Proteins involved in cell survival and signal transduction were more abundant at 24 h postinfection. Several of the differentially expressed proteins had not been previously implicated in response to the parasite, while the others support the previously identified proteins. Selected proteomics results were validated by real-time PCR and immunoblot analyses. Similar changes were observed in L. donovani-infected human monocyte-derived primary macrophages. The effect of RNA interference (RNAi)-mediated gene knockdown of proteins validated the relevance of the host quantitative proteomic screen. Our findings indicate that the host cell proteome is modulated after L. donovani infection, provide evidence for global reprogramming of cell metabolism, and demonstrate the complex relations between the host and parasite at the molecular level.

摘要

杜氏利什曼原虫是一种原生动物寄生虫,是内脏利什曼病的病原体。它在巨噬细胞的恶劣环境中生存和繁殖。为了研究细胞内寄生虫如何操纵宿主细胞环境,我们对感染杜氏利什曼原虫后的人单核细胞衍生巨噬细胞(THP-1)进行了定量蛋白质组学研究。我们使用相对和绝对定量的等压标签(iTRAQ)方法和液相色谱-串联质谱(LC-MS/MS)来比较未感染和感染杜氏利什曼原虫的THP-1细胞的表达谱。我们检测到关键代谢途径中蛋白质表达的改变,包括糖酵解和脂肪酸氧化,这表明寄生虫对细胞代谢进行了全面的重新编程。在感染后24小时观察到参与基因转录、RNA剪接(异质核糖核蛋白[hnRNPs])、组蛋白以及DNA修复和复制的蛋白质丰度增加。参与细胞存活和信号转导的蛋白质在感染后24小时更为丰富。一些差异表达的蛋白质以前未被认为与对寄生虫的反应有关,而其他蛋白质则支持先前鉴定的蛋白质。通过实时PCR和免疫印迹分析验证了选定的蛋白质组学结果。在感染杜氏利什曼原虫的人单核细胞衍生的原代巨噬细胞中也观察到了类似的变化。RNA干扰(RNAi)介导的蛋白质基因敲低的效果验证了宿主定量蛋白质组学筛选的相关性。我们的研究结果表明,杜氏利什曼原虫感染后宿主细胞蛋白质组受到调节,为细胞代谢的全面重新编程提供了证据,并在分子水平上证明了宿主与寄生虫之间的复杂关系。

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