Garman Elspeth F, Weik Martin
Laboratory of Molecular Biophysics, Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK.
Université Grenoble Alpes, IBS, F-38044 Grenoble, France.
J Synchrotron Radiat. 2015 Mar;22(2):195-200. doi: 10.1107/S160057751500380X. Epub 2015 Feb 27.
Radiation damage induced by X-ray beams during macromolecular diffraction experiments remains an issue of concern in structural biology. While advances in our understanding of this phenomenon, driven in part by a series of workshops in this area, undoubtedly have been and are still being made, there are still questions to be answered. Eight papers in this volume give a flavour of ongoing investigations, addressing various issues. These range over: a proposed new metric derived from atomic B-factors for identifying potentially damaged amino acid residues, a study of the relative damage susceptibility of protein and DNA in a DNA/protein complex, a report of an indication of specific radiation damage to a protein determined from data collected using an X-ray free-electron laser (FEL), an account of the challenges in FEL raw diffraction data analysis, an exploration of the possibilities of using radiation damage induced phasing to solve structures using FELs, simulations of radiation damage as a function of FEL temporal pulse profiles, results on the influence of radiation damage during scanning X-ray diffraction measurements and, lastly, consideration of strategies for minimizing radiation damage during SAXS experiments. In this short introduction, these contributions are briefly placed in the context of other current work on radiation damage in the field.
在大分子衍射实验中,X射线束引起的辐射损伤仍是结构生物学中一个备受关注的问题。尽管在该领域一系列研讨会的推动下,我们对这一现象的理解无疑已经取得并仍在取得进展,但仍有一些问题有待解答。本卷中的八篇论文展示了正在进行的研究情况,涉及各种问题。这些问题包括:一种从原子B因子推导出来的用于识别潜在受损氨基酸残基的新指标;对DNA/蛋白质复合物中蛋白质和DNA相对损伤敏感性的研究;一份关于使用X射线自由电子激光(FEL)收集的数据确定蛋白质特定辐射损伤迹象的报告;FEL原始衍射数据分析中的挑战;探索利用辐射损伤诱导的相位法使用FEL解析结构的可能性;作为FEL时间脉冲轮廓函数的辐射损伤模拟;扫描X射线衍射测量过程中辐射损伤影响的结果;最后是关于在小角X射线散射(SAXS)实验中最小化辐射损伤策略的思考。在这篇简短的引言中,将这些贡献简要地置于该领域当前关于辐射损伤的其他工作背景下。