Qin Yuxuan, Han Yuzhu, Shang QingMao, Li Pinglan
College of Food Science and Nutritional Engineering, China Agricultural University, Beijing 100083, China.
Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
J Biotechnol. 2015 Apr 20;200:59-60. doi: 10.1016/j.jbiotec.2015.02.020. Epub 2015 Feb 25.
Bacillus amyloliquefaciens L-H15 is a plant growth promoting rhizobacteria (PGPR) isolated from the cucumber seedling substrate collected in Beijing, China. The complete genome of B. amyloliquefaciens L-H15 consists of one single circular chromosome (3,864,316 bp) without any plasmid. From the genome, we identified clusters responsible for non-ribosomal synthesis of secondary metabolites, and genes related to the plant growth promotion hormone such as indole-3-acetic acid (IAA) and acetoin secretion. In addition, genes that contribute to biofilm formation were also found on the genome of L-H15. Complete genome information enables further study on the beneficial interactions between B. amyloliquefaciens L-H15 and host plants, and the future application of B. amyloliquefaciens L-H15 as biofertilizer and biocide.
解淀粉芽孢杆菌L-H15是一种从中国北京收集的黄瓜幼苗基质中分离出的植物促生根际细菌(PGPR)。解淀粉芽孢杆菌L-H15的完整基因组由一条单一的环状染色体(3,864,316 bp)组成,不含任何质粒。从该基因组中,我们鉴定出负责次生代谢产物非核糖体合成的基因簇,以及与植物生长促进激素如吲哚-3-乙酸(IAA)和3-羟基丁酮分泌相关的基因。此外,在L-H15的基因组上还发现了有助于生物膜形成的基因。完整的基因组信息有助于进一步研究解淀粉芽孢杆菌L-H15与宿主植物之间的有益相互作用,以及解淀粉芽孢杆菌L-H15作为生物肥料和生物杀灭剂的未来应用。