Ko Kwan Soo, Choi Ji-Young, Kim Joo, Park Myoung Kyu
Department of Molecular Cell Biology, Samsung Biomedical Research Institute, Sungkyunkwan University School of Medicine, Suwon, Korea,
Curr Microbiol. 2015 Jun;70(6):894-7. doi: 10.1007/s00284-015-0810-1. Epub 2015 Apr 2.
In this study, we reported two gram-negative bacteria that were isolated from bitterns, designated as SKKU-TP7(T) and SKKU-TP20, representing a novel species of Citrobacter. Based on the 16S rRNA gene sequences, the two strains were found to be closely related and showed the highest pairwise similarity with Citrobacter farmeri CDC 2992-81(T) (97.1-97.3 %) and other Citrobacter species. Cellular fatty acid analysis revealed that the profiles of strains SKKU-TP7(T) and SKKU-TP20 were similar to those of related species of Citrobacter. The major cellular fatty acids were C16:0 (31.5 %), summed feature 3 (C16:1 ω7c, C16:1 ω6c, 19.7 %), summed feature 8 (C18:1 ω7c, C18:1 ω6c, 11.9 %), C17:0 cyclo (10.7 %), and summed feature 2 (C12:0 aldehyde/unknown 10928, 9.5 %). Although the strains could utilize sucrose and raffinose as a carbon source, they did not produce ornithine decarboxylase and urease. The biochemical and genotypic characteristics indicate that strains SKKU-TP7(T) and SKKU-TP20 represent a novel species of Citrobacter, for which the name Citrobacter bitterns sp. nov. is proposed. The type strain is SKKU-TP7(T) (=KCTC 42139(T) = JCM 30009(T)).
在本研究中,我们报道了从麻鸦中分离出的两株革兰氏阴性菌,命名为SKKU-TP7(T)和SKKU-TP20,它们代表柠檬酸杆菌属的一个新物种。基于16S rRNA基因序列,发现这两株菌亲缘关系密切,与法氏柠檬酸杆菌CDC 2992-81(T)(97.1-97.3%)及其他柠檬酸杆菌属物种的成对相似性最高。细胞脂肪酸分析表明,菌株SKKU-TP7(T)和SKKU-TP20的脂肪酸谱与柠檬酸杆菌属相关物种相似。主要细胞脂肪酸为C16:0(31.5%)、总和特征3(C16:1 ω7c、C16:1 ω6c,19.7%)、总和特征8(C18:1 ω7c、C18:1 ω6c,11.9%)、C17:0环丙烷(10.7%)和总和特征2(C12:0醛/未知10928,9.5%)。虽然这些菌株可以利用蔗糖和棉子糖作为碳源,但它们不产生鸟氨酸脱羧酶和脲酶。生化和基因型特征表明,菌株SKKU-TP7(T)和SKKU-TP20代表柠檬酸杆菌属的一个新物种,为此提出新名称麻鸦柠檬酸杆菌(Citrobacter bitterns sp. nov.)。模式菌株为SKKU-TP7(T)(=KCTC 42139(T)=JCM 30009(T))。