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通过全基因组测序鉴定出与慢性乙型肝炎急性肝衰竭相关的乙肝病毒表面和核心基因新点突变。

New point mutations in surface and core genes of hepatitis B virus associated with acute on chronic liver failure identified by complete genomic sequencing.

作者信息

Xu Hangdi, Zhao Mingfei, Lou Guohua, Zheng Min, Cao Qingyi, Chen Zhi

机构信息

Sir Run Run Shaw Hospital, Zhejiang University, Hangzhou, Zhejiang, China.

Department of Neurosurgery, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China.

出版信息

PLoS One. 2015 Apr 7;10(4):e0123139. doi: 10.1371/journal.pone.0123139. eCollection 2015.

Abstract

The objective of this study was to identify new viral biomarkers associated with acute on chronic liver failure (ACLF) by complete genomic sequencing of HBV. Hepatitis B virus mutations associated with ACLF were screened by Illumina high-throughput sequencing in twelve ACLF cases and twelve age-matched mild chronic hepatitis B patients, which were validated in 438 chronic hepatitis B patients (80 asymptomatic carriers, 152 mild chronic hepatitis B patients, 102 severe chronic hepatitis B patients and 104 ACLF patients) by direct sequencing. The results of Illumina sequencing showed that the mutations at 7 sites (T216C, G285A, A1846T, G1896A, C1913A/G, A2159G, and A2189C) of 12 ACLF patients were significantly higher than those of 12 controls. In the validation cohorts, a significantly higher ratio of genotype B to C was found in patients with ACLF than in patients with non-ACLF. Multivariate analysis showed that T216C, G1896A, C1913A/G and A2159G/C were independent risk factors for ACLF. C216 in any combination, A/G1913 in any combination, and G/C2159 in any combination had high specificity for ACLF. In summary, T216C and A2159G/C mutations were novel factors independently associated with ACLF. Combined mutations in hepatitis B cases could play important roles in ACLF development.

摘要

本研究的目的是通过对乙肝病毒(HBV)进行全基因组测序,鉴定与慢加急性肝衰竭(ACLF)相关的新病毒生物标志物。通过Illumina高通量测序对12例ACLF患者和12例年龄匹配的轻度慢性乙型肝炎患者进行与ACLF相关的乙肝病毒突变筛查,并通过直接测序在438例慢性乙型肝炎患者(80例无症状携带者、152例轻度慢性乙型肝炎患者、102例重度慢性乙型肝炎患者和104例ACLF患者)中进行验证。Illumina测序结果显示,12例ACLF患者的7个位点(T216C、G285A、A1846T、G1896A、C1913A/G、A2159G和A2189C)的突变显著高于12例对照。在验证队列中,发现ACLF患者中B基因型与C基因型的比例显著高于非ACLF患者。多因素分析显示,T216C、G1896A、C1913A/G和A2159G/C是ACLF的独立危险因素。任意组合的C216、任意组合的A/G1913和任意组合的G/C2159对ACLF具有高特异性。总之,T216C和A2159G/C突变是与ACLF独立相关的新因素。乙肝病例中的联合突变可能在ACLF的发生发展中起重要作用。

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