Toledo Rodrigo A, Dahia Patricia L M
aDivision of Hematology and Medical Oncology, Department of Medicine bCancer Therapy and Research Center, University of Texas Health Science Center at San Antonio, Texas, USA.
Curr Opin Endocrinol Diabetes Obes. 2015 Jun;22(3):169-79. doi: 10.1097/MED.0000000000000150.
About 40% of the neuroendocrine tumors pheochromocytomas and paragangliomas (PPGLs) are caused by an inherited mutation. Diagnostic genetic screening is recommended for patients and their families. However, the number of susceptibility genes involved is high and continues to grow, making conventional sequencing costly and burdensome. Next-generation sequencing (NGS) enables accurate, thorough, and cost-effective identification of inherited mutations. Here we review recent successes, limitations, and the future of NGS for diagnosis of pheochromocytoma and paraganglioma syndromes.
NGS-based screen of genetic disorders in the clinical setting shows improved diagnostic rates over conventional tests. Both broad, whole-exome sequencing, and targeted NGS approaches have been tested for screening of PPGLs, with accurate mutation detection, higher speed, and reduced costs compared with current assays. Flexibility to expand the targeted gene set is immediate in whole-exome sequencing, and adjustable in targeted NGS, but both methods have limitations.
The high degree of genetic heterogeneity and heritability of PPGLs make NGS an ideal medium for their diagnostic screening. However, improved detection of large genomic defects and underrepresented gene areas are needed before NGS can fully realize its potential as the premier option for routine genetic testing of these syndromes.
约40%的神经内分泌肿瘤嗜铬细胞瘤和副神经节瘤(PPGLs)由遗传突变引起。建议对患者及其家属进行诊断性基因筛查。然而,涉及的易感基因数量众多且持续增加,使得传统测序成本高昂且负担沉重。新一代测序(NGS)能够准确、全面且经济高效地鉴定遗传突变。在此,我们综述NGS在嗜铬细胞瘤和副神经节瘤综合征诊断方面的近期成果、局限性及未来发展。
临床环境中基于NGS的遗传疾病筛查显示,其诊断率高于传统检测。全外显子组测序和靶向NGS方法均已用于PPGLs筛查,与现有检测方法相比,具有准确的突变检测、更高速度和更低成本。全外显子组测序可立即灵活扩展靶向基因集,靶向NGS则可进行调整,但两种方法都有局限性。
PPGLs高度的遗传异质性和遗传性使NGS成为其诊断筛查的理想手段。然而,在NGS能够充分发挥其作为这些综合征常规基因检测首选方法的潜力之前,需要改进对大基因组缺陷和代表性不足基因区域的检测能力。