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迈向整合结构质谱法:混合方法的优势。

Towards integrative structural mass spectrometry: Benefits from hybrid approaches.

作者信息

Marcoux Julien, Cianférani Sarah

机构信息

Laboratoire de Spectrométrie de Masse Bio-Organique (LSMBO), IPHC, Université de Strasbourg, 25 rue Becquerel, 67087 Strasbourg, France; IPHC, CNRS, UMR 7178, 67087 Strasbourg, France.

出版信息

Methods. 2015 Nov 1;89:4-12. doi: 10.1016/j.ymeth.2015.05.024. Epub 2015 May 29.

Abstract

Structural mass spectrometry encompasses an increasing range of methods aimed at collecting as much structural information as possible on a biomolecule or its related complexes. Originally limited to the analysis of the primary structures of proteins, mass spectrometry has evolved over the past 20 years to provide information on the secondary, tertiary and even quaternary structure of proteins. Furthermore, the systems investigated with these methods have become more and more complex, as many developments have progressively overcome the main challenges of the size, heterogeneity, and/or solubility of protein complexes. A decade ago, most of these techniques were still the playground of a handful of specialists. However, the potential of these methods and their complementarity to other classical biophysical methods have driven an increasing number of users to develop new techniques and, perhaps more crucially, manufacturers have developed improved instruments and solutions/kits that are now commercially available. Today, more and more groups are combining structural proteomics techniques in order to gain additional information, as we will see in this review. This article will particularly focus on the analysis of peptides and protein complexes. First, the main methods of structural proteomics will be described. Then different possible combinations will be described, including how complementary they are, what synergistic information can be obtained from them, and what their current limitations are.

摘要

结构质谱涵盖了越来越多的方法,旨在获取生物分子或其相关复合物尽可能多的结构信息。质谱最初仅限于蛋白质一级结构的分析,在过去20年中不断发展,以提供蛋白质二级、三级甚至四级结构的信息。此外,随着许多进展逐步克服了蛋白质复合物在大小、异质性和/或溶解性方面的主要挑战,用这些方法研究的系统变得越来越复杂。十年前,这些技术大多仍为少数专家所掌握。然而,这些方法的潜力及其与其他经典生物物理方法的互补性促使越来越多的用户开发新技术,或许更关键的是,制造商开发出了经过改进的仪器以及现在可商购的解决方案/试剂盒。如今,越来越多的团队正在结合结构蛋白质组学技术以获取更多信息,正如我们将在本综述中看到的那样。本文将特别聚焦于肽和蛋白质复合物的分析。首先,将描述结构蛋白质组学的主要方法。然后将描述不同的可能组合,包括它们的互补程度、能从它们那里获得何种协同信息以及它们当前的局限性。

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