来自中国广西的一株属于新亚基因型2.1c的经典猪瘟病毒分离株的全基因组序列。
Complete genome sequence of a classical Swine Fever virus isolate belonging to a new subgenotype, 2.1c, from guangxi province, china.
作者信息
Shao Weixing, Huang Yaohua, Liu Shuang, Wu Faxing, Zhang Zhi, Dong Yaqin, Li Xiaocheng
机构信息
China Animal Health and Epidemiology Center, Division of Surveillance of Livestock Diseases, Qingdao, China.
China Animal Health and Epidemiology Center, Division of Surveillance of Livestock Diseases, Qingdao, China
出版信息
Genome Announc. 2015 Jun 4;3(3):e00311-15. doi: 10.1128/genomeA.00311-15.
Abstract
The complete genome sequence of a field isolate of classical swine fever strain (CSFV), GXF29/2013, was determined in this study. This strain was originally isolated from infected pigs in Guangxi Province, China. The most significant difference in the amino acid sequence of the polyprotein from subgenotypes 2.1a and 2.1b is an SPA→APV amino acid substitution at positions 88 and 90 in the E2 protein.
摘要
本研究测定了一株经典猪瘟病毒（CSFV）田间分离株GXF29/2013的全基因组序列。该毒株最初从中国广西省的感染猪中分离得到。2.1a和2.1b亚基因型多聚蛋白氨基酸序列的最显著差异是E2蛋白88位和90位的SPA→APV氨基酸替换。
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本文引用的文献
1
Genetic typing of classical swine fever virus isolates from China.
Transbound Emerg Dis. 2013 Aug;60(4):370-5. doi: 10.1111/j.1865-1682.2012.01346.x. Epub 2012 Jun 4.
2
Genetic characterization of E2 gene of classical swine fever virus by restriction fragment length polymorphism and phylogenetic analysis.
Virus Genes. 2010 Jun;40(3):389-96. doi: 10.1007/s11262-010-0465-8. Epub 2010 Mar 9.
3
Phylogenetic analysis of classical swine fever virus isolated from Taiwan.
Vet Microbiol. 2005 Apr 10;106(3-4):187-93. doi: 10.1016/j.vetmic.2004.12.014.
4
Phylogenetic analysis of classical swine fever virus in Taiwan.
Arch Virol. 2005 Jun;150(6):1101-19. doi: 10.1007/s00705-004-0485-6. Epub 2005 Feb 10.
5
Clinical signs and epidemiology of classical swine fever: a review of new knowledge.
Vet J. 2003 Jan;165(1):11-20. doi: 10.1016/s1090-0233(02)00112-0.
6
Phylogenetic comparison of classical swine fever virus in China.
Virus Res. 2001 Dec 4;81(1-2):29-37. doi: 10.1016/s0168-1702(01)00366-5.
7
Genetic typing of classical swine fever virus.
Vet Microbiol. 2000 Apr 13;73(2-3):137-57. doi: 10.1016/s0378-1135(00)00141-3.
8
Antigenic differentiation of pestivirus strains with monoclonal antibodies against hog cholera virus.
Vet Microbiol. 1989 Nov;21(1):9-20. doi: 10.1016/0378-1135(89)90014-x.
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