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由小分子、分子限制、表面堆积和纳米限域引起的生物分子拥挤效应

Biomolecular Crowding Arising from Small Molecules, Molecular Constraints, Surface Packing, and Nano-Confinement.

作者信息

Hilaire Mary Rose, Abaskharon Rachel M, Gai Feng

机构信息

Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.

出版信息

J Phys Chem Lett. 2015 Jul 2;6(13):2546-53. doi: 10.1021/acs.jpclett.5b00957. Epub 2015 Jun 18.

Abstract

The effect of macromolecular crowding on the structure, dynamics, and reactivity of biomolecules is well established and the relevant research has been extensively reviewed. Herein, we focus our discussion on crowding effects arising from small cosolvent molecules and densely packed surface conditions. In addition, we highlight recent efforts that capitalize on the excluded volume effect for various tailored biochemical and biophysical applications. Specifically, we discuss how a targeted increase in local mass density can be exploited to gain insight into the folding dynamics of the protein of interest and how confinement via reverse micelles can be used to study a range of biophysical questions, from protein hydration dynamics to amyloid formation.

摘要

大分子拥挤对生物分子的结构、动力学和反应性的影响已得到充分证实,相关研究也已得到广泛综述。在此,我们将讨论重点放在由小分子共溶剂和密集堆积的表面条件引起的拥挤效应上。此外,我们还强调了最近利用排阻体积效应进行各种定制生化和生物物理应用的研究成果。具体而言,我们将讨论如何利用局部质量密度的有针对性增加来深入了解目标蛋白质的折叠动力学,以及如何通过反胶束进行限制来研究一系列生物物理问题,从蛋白质水合动力学到淀粉样蛋白形成。

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