Du Juan, Liu Yang, Lai Qiliang, Dong Chunming, Xie Yanrong, Shao Zongze
State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, The Third Institute of State Oceanic Administration; Fujian Collaborative Innovation Center for Exploitation and Utilization of Marine Biological Resources; Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen 361005, PR China.
Int J Syst Evol Microbiol. 2015 Oct;65(10):3379-3383. doi: 10.1099/ijsem.0.000424.
An aerobic, Gram-stain-negative, rod-shaped and non-motile bacterium, JS14SB-1T, was isolated from the surface freshwater of the Jiulong River, PR China. Strain JS14SB-1T grew at 15–38 °C (optimum, 28–35 °C), at pH 6.0–9.0 (optimum pH 7.0) and in the presence of 1.0–7.0 % (w/v) NaCl [optimum 3.0–5.0 % (w/v)]. Phylogenetic analysis, based on 16S rRNA gene sequences, indicated that strain JS14SB-1T was affiliated to the genus Kordia, sharing low similarities (95.1–97.1 %) to all type strains of species of this genus. The digital DNA–DNA hybridization (DDH) value between strain JS14SB-1T and the closely related strain Kordia jejudonensis SSK3-3T was 20.70 ± 2.33 % and far below the 70 % DDH value taken as the gold standard for delineation of bacterial species. The major fatty acids were identified as iso-C15 : 0 and iso-C17 : 0 3-OH. The polar lipids were phosphatidylethanolamine, glycolipid, aminolipid, several unidentified phospholipids and lipids. The predominant menaquinone was MK-6. The G+C content of the genomic DNA was 33.8 mol%. Based on the phenotypic, phylogenetic and chemotaxonomic distinctiveness, strain JS14SB-1T is considered to represent a novel species of the genus Kordia, for which the name Kordia zhangzhouensis sp. nov. is proposed; the type strain is JS14SB-1T ( = MCCC 1A00726T = KCTC 42140T).
从中国福建省九龙江表层淡水中分离出一株需氧、革兰氏染色阴性、杆状且无运动性的细菌,命名为JS14SB-1T。菌株JS14SB-1T在15-38 °C(最适温度为28-35 °C)、pH值6.0-9.0(最适pH值7.0)以及1.0-7.0%(w/v)NaCl(最适浓度为3.0-5.0%(w/v))条件下生长。基于16S rRNA基因序列的系统发育分析表明,菌株JS14SB-1T隶属于科尔迪氏菌属,与该属所有模式菌株的相似性较低(95.1-97.1%)。菌株JS14SB-1T与亲缘关系最近的菌株济州科尔迪氏菌SSK3-3T的数字DNA-DNA杂交(DDH)值为20.70 ± 2.33%,远低于作为界定细菌物种金标准的70% DDH值。主要脂肪酸鉴定为异C15 : 0和异C17 : 0 3-OH。极性脂包括磷脂酰乙醇胺、糖脂、氨基脂、几种未鉴定的磷脂和脂类。主要甲基萘醌为MK-6。基因组DNA的G+C含量为33.8 mol%。基于表型、系统发育和化学分类特征,菌株JS14SB-1T被认为代表科尔迪氏菌属的一个新物种,为此提出新名称漳州科尔迪氏菌(Kordia zhangzhouensis sp. nov.);模式菌株为JS14SB-1T(=MCCC 1A00726T=KCTC 42140T)。