Halweg-Edwards Andrea L, Grau William C, Winkler James D, Garst Andrew D, Gill Ryan T
Department of Chemical and Biological Engineering, University of Colorado Boulder, United States.
Department of Chemistry and Biochemistry, University of Colorado, United States.
Curr Opin Chem Biol. 2015 Oct;28:150-5. doi: 10.1016/j.cbpa.2015.07.009. Epub 2015 Aug 22.
Since the 1970s technological advancements in the fields of synthetic biology and metabolic engineering have led to a dramatic reduction in both time and cost required for generating genomic mutations in a variety of organisms. The union of genomic editing machinery, DNA inkjet printers, and bioinformatics algorithms allows engineers to design a library of thousands of unique oligos as well as build and test these designs on a ∼2 months time-scale and at a cost of roughly ∼0.3 cents per base pair. The implications of these capabilities for a variety of fields are far-reaching, with potential impacts in defense, agricultural, human health, and environmental research. The explosion of synthetic biology applications over the past two decades have led many to draw parallels between biological engineering and the computer sciences. In this review, we highlight some important parallels between these fields and emphasize the importance of engineering design strategies.
自20世纪70年代以来,合成生物学和代谢工程领域的技术进步使得在各种生物体中产生基因组突变所需的时间和成本大幅降低。基因组编辑工具、DNA喷墨打印机和生物信息学算法的结合,使工程师能够设计出包含数千种独特寡核苷酸的文库,并在大约两个月的时间内构建和测试这些设计,成本约为每碱基对0.3美分。这些能力对各个领域的影响深远,在国防、农业、人类健康和环境研究等方面都有潜在影响。在过去二十年中,合成生物学应用的激增促使许多人将生物工程与计算机科学进行类比。在这篇综述中,我们强调了这些领域之间的一些重要相似之处,并强调了工程设计策略的重要性。