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基于蒙特卡罗方法的光学断层成像的网格优化

Mesh Optimization for Monte Carlo-Based Optical Tomography.

作者信息

Edmans Andrew, Intes Xavier

机构信息

Department of Biomedical Engineering, Rensselaer Polytechnic Institute, 110 8th street, Troy, NY 12180, USA.

出版信息

Photonics. 2015 Jun;2(2):375-391. doi: 10.3390/photonics2020375. Epub 2015 Apr 9.

DOI:10.3390/photonics2020375
PMID:26566523
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4640680/
Abstract

Mesh-based Monte Carlo techniques for optical imaging allow for accurate modeling of light propagation in complex biological tissues. Recently, they have been developed within an efficient computational framework to be used as a forward model in optical tomography. However, commonly employed adaptive mesh discretization techniques have not yet been implemented for Monte Carlo based tomography. Herein, we propose a methodology to optimize the mesh discretization and analytically rescale the associated Jacobian based on the characteristics of the forward model. We demonstrate that this method maintains the accuracy of the forward model even in the case of temporal data sets while allowing for significant coarsening or refinement of the mesh.

摘要

用于光学成像的基于网格的蒙特卡罗技术能够对光在复杂生物组织中的传播进行精确建模。最近,它们已在一个高效的计算框架内得到发展,用作光学层析成像中的正向模型。然而,常用的自适应网格离散化技术尚未应用于基于蒙特卡罗的层析成像。在此,我们提出一种方法来优化网格离散化,并根据正向模型的特性对相关雅可比矩阵进行解析重缩放。我们证明,即使在处理时间数据集的情况下,该方法也能保持正向模型的准确性,同时允许对网格进行显著的粗化或细化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/13c126882cea/nihms734831f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/55e7ab0775f8/nihms734831f1.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/43e655ec48b8/nihms734831f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/dc776389f972/nihms734831f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/00a433423db3/nihms734831f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/001f18a2f069/nihms734831f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/c71410306f4f/nihms734831f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/142ff4ed49f6/nihms734831f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/13c126882cea/nihms734831f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/55e7ab0775f8/nihms734831f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/edd0f628f859/nihms734831f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/43e655ec48b8/nihms734831f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/dc776389f972/nihms734831f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/00a433423db3/nihms734831f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/001f18a2f069/nihms734831f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/c71410306f4f/nihms734831f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/142ff4ed49f6/nihms734831f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa32/4640680/13c126882cea/nihms734831f9.jpg

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本文引用的文献

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Hyperspectral time-resolved wide-field fluorescence molecular tomography based on structured light and single-pixel detection.基于结构光和单像素检测的高光谱时间分辨宽场荧光分子断层成像
Opt Lett. 2015 Feb 1;40(3):431-4. doi: 10.1364/OL.40.000431.
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L(p) regularization for early gate fluorescence molecular tomography.早期门控荧光分子断层成像的 L(p) 正则化
Opt Lett. 2014 Jul 15;39(14):4156-9. doi: 10.1364/OL.39.004156.
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Small animal fluorescence and bioluminescence tomography: a review of approaches, algorithms and technology update.
小动物荧光和生物发光断层成像:方法、算法和技术更新的综述。
Phys Med Biol. 2014 Jan 6;59(1):R1-64. doi: 10.1088/0031-9155/59/1/R1. Epub 2013 Dec 16.
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Methodology to optimize detector geometry in fluorescence tomography of tissue using the minimized curvature of the summed diffuse sensitivity projections.利用总漫射灵敏度投影的最小曲率来优化组织荧光断层扫描中探测器几何结构的方法。
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Review of Monte Carlo modeling of light transport in tissues.组织中光传输的蒙特卡罗建模综述。
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