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使用序数模式量化心脏动力学的时空复杂性。

Quantifying spatiotemporal complexity of cardiac dynamics using ordinal patterns.

作者信息

Schlemmer Alexander, Berg Sebastian, Shajahan T K, Luther Stefan, Parlitz Ulrich

出版信息

Annu Int Conf IEEE Eng Med Biol Soc. 2015 Aug;2015:4049-52. doi: 10.1109/EMBC.2015.7319283.

Abstract

Analyzing the dynamics of complex excitation wave patterns in cardiac tissue plays a key role for understanding the origin of life-threatening arrhythmias and for devising novel approaches to control them. The quantification of spatiotemporal complexity, however, remains a challenging task. This holds in particular for the analysis of data from fluorescence imaging (optical mapping), which allows for the measurement of membrane potential and intracellular calcium at high spatial and temporal resolution. Hitherto methods, like dominant frequency maps and the analysis of phase singularities, address important aspects of cardiac dynamics, but they consider very specific properties of excitable media, only. This article focuses on the benchmark of spatial complexity measures over time in the context of cardiac cell cultures. Standard Shannon Entropy and Spatial Permutation Entropy, an adaption of [1], have been implemented and applied to optical mapping data from embryonic chicken cell culture experiments. We introduce spatial separation of samples when generating ordinal patterns and show its importance for Spatial Permutation Entropy. Results suggest that Spatial Permutation Entropies provide a robust and interpretable measure for detecting qualitative changes in the dynamics of this excitable medium.

摘要

分析心脏组织中复杂兴奋波模式的动力学对于理解危及生命的心律失常的起源以及设计控制它们的新方法起着关键作用。然而,时空复杂性的量化仍然是一项具有挑战性的任务。这在荧光成像(光学映射)数据的分析中尤为如此,荧光成像能够在高空间和时间分辨率下测量膜电位和细胞内钙。迄今为止的方法,如主导频率图和相位奇点分析,解决了心脏动力学的重要方面,但它们仅考虑了可兴奋介质的非常特定的属性。本文重点关注心脏细胞培养背景下空间复杂性度量随时间的基准测试。已经实现了标准香农熵和空间排列熵([1]的一种改编),并将其应用于来自胚胎鸡细胞培养实验的光学映射数据。我们在生成序数模式时引入样本的空间分离,并展示其对空间排列熵的重要性。结果表明,空间排列熵为检测这种可兴奋介质动力学中的定性变化提供了一种稳健且可解释的度量。

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