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反硝化琼氏菌多模块几丁质酶的一个小的几丁质活性溶菌多糖单加氧酶结构域的结构与功能表征

Structural and functional characterization of a small chitin-active lytic polysaccharide monooxygenase domain of a multi-modular chitinase from Jonesia denitrificans.

作者信息

Mekasha Sophanit, Forsberg Zarah, Dalhus Bjørn, Bacik John-Paul, Choudhary Swati, Schmidt-Dannert Claudia, Vaaje-Kolstad Gustav, Eijsink Vincent G H

机构信息

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Ås, Norway.

Department of Medical Biochemistry, Institute for Clinical Medicine, University of Oslo, Norway.

出版信息

FEBS Lett. 2016 Jan;590(1):34-42. doi: 10.1002/1873-3468.12025. Epub 2015 Dec 28.

Abstract

Lytic polysaccharide monooxygenases (LPMOs) boost enzymatic depolymerization of recalcitrant polysaccharides, such as chitin and cellulose. We have studied a chitin-active LPMO domain (JdLPMO10A) that is considerably smaller (15.5 kDa) than all structurally characterized LPMOs so far and that is part of a modular protein containing a GH18 chitinase. The 1.55 Å resolution structure revealed deletions of interacting loops that protrude from the core β-sandwich scaffold in larger LPMO10s. Despite these deletions, the enzyme is active on alpha- and beta-chitin, and the chitin-binding surface previously described for larger LPMOs is fully conserved. JdLPMO10A may represent a minimal scaffold needed to catalyse the powerful LPMO reaction.

摘要

裂解多糖单加氧酶(LPMOs)可促进几丁质和纤维素等难降解多糖的酶促解聚。我们研究了一种几丁质活性LPMO结构域(JdLPMO10A),它比目前所有已解析结构的LPMOs都要小得多(15.5 kDa),并且是一种包含GH18几丁质酶的模块化蛋白质的一部分。分辨率为1.55 Å的结构显示,在更大的LPMO10中,从核心β-三明治支架突出的相互作用环存在缺失。尽管有这些缺失,该酶对α-几丁质和β-几丁质仍具有活性,并且先前描述的更大LPMOs的几丁质结合表面完全保守。JdLPMO10A可能代表了催化强大的LPMO反应所需的最小支架。

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