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气相反应性中的过渡态后动力学:分支和旋转活化的重要性。

Post-Transition State Dynamics in Gas Phase Reactivity: Importance of Bifurcations and Rotational Activation.

作者信息

Martín-Sómer Ana, Yáñez Manuel, Hase William L, Gaigeot Marie-Pierre, Spezia Riccardo

机构信息

Departamento de Química, Facultad de Ciencias, Módulo 13, Universidad Autónoma de Madrid , Campus de Excelencia UAM-CSIC, Cantoblanco, E-28049 Madrid, Spain.

Université d'Evry Val d'Essonne , UMR 8587 LAMBE, Boulevard F. Mitterrand, 91025 Evry Cedex, France.

出版信息

J Chem Theory Comput. 2016 Mar 8;12(3):974-82. doi: 10.1021/acs.jctc.5b01135. Epub 2016 Feb 10.

Abstract

Beyond the established use of thermodynamic vs kinetic control to explain chemical reaction selectivity, the concept of bifurcations on a potential energy surface (PES) is proving to be of pivotal importance with regard to selectivity. In this article, we studied by means of post-transition state (TS) direct dynamics simulations the effect that vibrational and rotational excitation at the TS may have on selectivity on a bifurcating PES. With this aim, we studied the post-TS unimolecular reactivity of the Ca(formamide) ion, for which Coulomb explosion and neutral loss reactions compete. The PES exhibits different kinds of nonintrinsic reaction coordinate (IRC) dynamics, among them PES bifurcations, which direct the trajectories to multiple reaction paths after passing the TS. Direct dynamics simulations were used to distinguish between the bifurcation non-IRC dynamics and non-IRC dynamics arising from atomistic motions directing the trajectories away from the IRC. Overall, we corroborated the idea that kinetic selectivity often does not reduce to a simple choice between paths with different barrier heights and instead dynamical behavior after passing the TS may be crucial. Importantly, rotational excitation may play a pivotal role on the reaction selectivity favoring nonthermodynamic products.

摘要

除了运用热力学控制与动力学控制来解释化学反应选择性这一既定方法外,势能面(PES)上的分支概念在选择性方面正被证明具有至关重要的意义。在本文中,我们通过后过渡态(TS)直接动力学模拟研究了过渡态处的振动和转动激发对分支势能面上选择性可能产生的影响。为此,我们研究了[Ca(甲酰胺)]²⁺离子的后过渡态单分子反应活性,其库仑爆炸反应和中性损失反应相互竞争。该势能面呈现出不同类型的非本征反应坐标(IRC)动力学,其中包括势能面分支,它会使轨迹在通过过渡态后导向多条反应路径。直接动力学模拟用于区分分支非IRC动力学和由原子运动导致轨迹偏离IRC的非IRC动力学。总体而言,我们证实了这样一种观点,即动力学选择性通常并非简单归结为在具有不同势垒高度的路径之间进行选择,相反,通过过渡态后的动力学行为可能至关重要。重要的是,转动激发可能在有利于非热力学产物的反应选择性方面发挥关键作用。

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