Kozlowska Mariana, Goclon Jakub, Rodziewicz Pawel
Institute of Chemistry, University of Bialystok, Ciolkowskiego Str. 1K, 15-245, Bialystok, Poland.
Interdisciplinary Center for Molecular Materials (ICMM) and Computer-Chemistry-Center (CCC), Friedrich-Alexander-University Erlangen-Nürnberg, Nägelsbachstr. 25, 91052, Erlangen, Germany.
Chemphyschem. 2016 Apr 18;17(8):1143-53. doi: 10.1002/cphc.201501182. Epub 2016 Feb 19.
We used static DFT calculations to analyze, in detail, the intramolecular hydrogen bonds formed in low-molecular-weight polyethylene glycol (PEG) with two to five repeat subunits. Both red-shifted O-H⋅⋅⋅O and blue-shifting C-H⋅⋅⋅O hydrogen bonds, which control the structural flexibility of PEG, were detected. To estimate the strength of these hydrogen bonds, the quantum theory of atoms in molecules was used. Car-Parrinello molecular dynamics simulations were used to mimic the structural rearrangements and hydrogen-bond breaking/formation in the PEG molecule at 300 K. The time evolution of the H⋅⋅⋅O bond length and valence angles of the formed hydrogen bonds were fully analyzed. The characteristic hydrogen-bonding patterns of low-molecular-weight PEG were described with an estimation of their lifetime. The theoretical results obtained, in particular the presence of weak C-H⋅⋅⋅O hydrogen bonds, could serve as an explanation of the PEG structural stability in the experimental investigation.
我们使用静态密度泛函理论(DFT)计算来详细分析在具有两到五个重复亚基的低分子量聚乙二醇(PEG)中形成的分子内氢键。检测到了控制PEG结构灵活性的红移O-H⋅⋅⋅O和蓝移C-H⋅⋅⋅O氢键。为了估计这些氢键的强度,使用了分子中的原子量子理论。采用Car-Parrinello分子动力学模拟来模拟PEG分子在300 K时的结构重排和氢键的断裂/形成。对形成的氢键的H⋅⋅⋅O键长和价角的时间演化进行了全面分析。描述了低分子量PEG的特征氢键模式,并估计了它们的寿命。所获得的理论结果,特别是弱C-H⋅⋅⋅O氢键的存在,可以作为实验研究中PEG结构稳定性的一种解释。