Wymore Adam S, Liu Cindy M, Hungate Bruce A, Schwartz Egbert, Price Lance B, Whitham Thomas G, Marks Jane C
Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
Department of Natural Resources and the Environment, University of New Hampshire, Durham, NH, USA.
Microb Ecol. 2016 May;71(4):825-34. doi: 10.1007/s00248-016-0735-7. Epub 2016 Feb 15.
Foliar chemistry influences leaf decomposition, but little is known about how litter chemistry affects the assemblage of bacterial communities during decomposition. Here we examined relationships between initial litter chemistry and the composition of the bacterial community in a stream ecosystem. We incubated replicated genotypes of Populus fremontii and P. angustifolia leaf litter that differ in percent tannin and lignin, then followed changes in bacterial community composition during 28 days of decomposition using 16S rRNA gene-based pyrosequencing. Using a nested experimental design, the majority of variation in bacterial community composition was explained by time (i.e., harvest day) (R(2) = 0.50). Plant species, nested within harvest date, explained a significant but smaller proportion of the variation (R(2) = 0.03). Significant differences in community composition between leaf species were apparent at day 14, but no significant differences existed among genotypes. Foliar chemistry correlated significantly with community composition at day 14 (r = 0.46) indicating that leaf litter with more similar phytochemistry harbor bacterial communities that are alike. Bacteroidetes and β-proteobacteria dominated the bacterial assemblage on decomposing leaves, and Verrucomicrobia and α- and δ-proteobacteria became more abundant over time. After 14 days, bacterial diversity diverged significantly between leaf litter types with fast-decomposing P. fremontii hosting greater richness than slowly decomposing P. angustifolia; however, differences were no longer present after 28 days in the stream. Leaf litter tannin, lignin, and lignin: N ratios all correlated negatively with diversity. This work shows that the bacterial community on decomposing leaves in streams changes rapidly over time, influenced by leaf species via differences in genotype-level foliar chemistry.
叶片化学性质影响叶片分解,但对于凋落物化学性质如何在分解过程中影响细菌群落的组合却知之甚少。在此,我们研究了溪流生态系统中初始凋落物化学性质与细菌群落组成之间的关系。我们对弗里蒙特杨和窄叶杨叶片凋落物的复制基因型进行了培养,这些基因型在单宁和木质素百分比上存在差异,然后在28天的分解过程中,使用基于16S rRNA基因的焦磷酸测序跟踪细菌群落组成的变化。采用嵌套实验设计,细菌群落组成的大部分变异可由时间(即收获日)来解释(R(2) = 0.50)。嵌套在收获日期内的植物物种解释了显著但较小比例的变异(R(2) = 0.03)。在第14天,叶片物种之间的群落组成存在显著差异,但基因型之间不存在显著差异。在第14天,叶片化学性质与群落组成显著相关(r = 0.46),这表明具有更相似植物化学性质的凋落物拥有相似的细菌群落。拟杆菌门和β-变形菌在分解叶片上的细菌组合中占主导地位,疣微菌门以及α-和δ-变形菌随着时间的推移变得更加丰富多样。14天后,在快速分解的弗里蒙特杨凋落物中,细菌多样性显著高于缓慢分解的窄叶杨凋落物;然而,在溪流中28天后差异不再存在。叶片凋落物的单宁、木质素以及木质素与氮的比率均与多样性呈负相关。这项研究表明,溪流中分解叶片上的细菌群落随时间迅速变化,受叶片物种通过基因型水平的叶片化学性质差异影响。