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拟南芥第4组成熟胚胎晚期丰富(LEA)蛋白的无结构N端区域在水分亏缺条件下对于折叠和伴侣样活性是必需的。

The Unstructured N-terminal Region of Arabidopsis Group 4 Late Embryogenesis Abundant (LEA) Proteins Is Required for Folding and for Chaperone-like Activity under Water Deficit.

作者信息

Cuevas-Velazquez Cesar L, Saab-Rincón Gloria, Reyes José Luis, Covarrubias Alejandra A

机构信息

From the Departamentos de Biología Molecular de Plantas and.

Ingeniería Celular y Biocatálisis, Instituto de Biotecnología, Universidad Nacional Autónoma de México, 62250 Cuernavaca, México.

出版信息

J Biol Chem. 2016 May 13;291(20):10893-903. doi: 10.1074/jbc.M116.720318. Epub 2016 Mar 22.

DOI:10.1074/jbc.M116.720318
PMID:27006402
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4865934/
Abstract

Late embryogenesis abundant (LEA) proteins are a conserved group of proteins widely distributed in the plant kingdom that participate in the tolerance to water deficit of different plant species. In silico analyses indicate that most LEA proteins are structurally disordered. The structural plasticity of these proteins opens the question of whether water deficit modulates their conformation and whether these possible changes are related to their function. In this work, we characterized the secondary structure of Arabidopsis group 4 LEA proteins. We found that they are disordered in aqueous solution, with high intrinsic potential to fold into α-helix. We demonstrate that complete dehydration is not required for these proteins to sample ordered structures because milder water deficit and macromolecular crowding induce high α-helix levels in vitro, suggesting that prevalent conditions under water deficit modulate their conformation. We also show that the N-terminal region, conserved across all group 4 LEA proteins, is necessary and sufficient for conformational transitions and that their protective function is confined to this region, suggesting that folding into α-helix is required for chaperone-like activity under water limitation. We propose that these proteins can exist as different conformers, favoring functional diversity, a moonlighting property arising from their structural dynamics.

摘要

胚胎发育晚期丰富(LEA)蛋白是一类保守的蛋白质,广泛分布于植物界,参与不同植物物种对水分亏缺的耐受性。计算机分析表明,大多数LEA蛋白在结构上是无序的。这些蛋白质的结构可塑性引发了这样一个问题:水分亏缺是否会调节它们的构象,以及这些可能的变化是否与它们的功能有关。在这项工作中,我们对拟南芥第4组LEA蛋白的二级结构进行了表征。我们发现它们在水溶液中是无序的,具有折叠成α-螺旋的高内在潜力。我们证明,这些蛋白质不需要完全脱水就能形成有序结构,因为较温和的水分亏缺和大分子拥挤在体外诱导了高α-螺旋水平,这表明水分亏缺下的普遍条件会调节它们的构象。我们还表明,在所有第4组LEA蛋白中保守的N端区域对于构象转变是必要且充分的,并且它们的保护功能仅限于该区域,这表明在水分限制下,折叠成α-螺旋是伴侣样活性所必需的。我们提出,这些蛋白质可以以不同的构象存在,有利于功能多样性,这是一种由其结构动力学产生的兼职特性。

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本文引用的文献

1
Intrinsically disordered proteins in cellular signalling and regulation.细胞信号转导和调控中的无规则卷曲蛋白
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Dissecting the cryoprotection mechanisms for dehydrins.剖析脱水素的冷冻保护机制。
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DISOPRED3: precise disordered region predictions with annotated protein-binding activity.DISOPRED3:具有注释蛋白质结合活性的精确无序区域预测
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Disorder and residual helicity alter p53-Mdm2 binding affinity and signaling in cells.紊乱和残余螺旋改变了细胞中 p53-Mdm2 的结合亲和力和信号转导。
Nat Chem Biol. 2014 Dec;10(12):1000-2. doi: 10.1038/nchembio.1668. Epub 2014 Nov 2.
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A group 6 late embryogenesis abundant protein from common bean is a disordered protein with extended helical structure and oligomer-forming properties.菜豆中的一种6组晚期胚胎发生丰富蛋白是一种具有延伸螺旋结构和寡聚体形成特性的无序蛋白。
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Functional characterization of selected LEA proteins from Arabidopsis thaliana in yeast and in vitro.拟南芥中选定的胚胎发育晚期丰富蛋白在酵母中和体外的功能特性分析
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Coupled folding and binding of the disordered protein PUMA does not require particular residual structure.无序蛋白PUMA的折叠与结合过程并不需要特定的残余结构。
J Am Chem Soc. 2014 Apr 9;136(14):5197-200. doi: 10.1021/ja4125065. Epub 2014 Mar 31.
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Multifarious roles of intrinsic disorder in proteins illustrate its broad impact on plant biology.内在无序在蛋白质中扮演着多种多样的角色,这说明了它对植物生物学的广泛影响。
Plant Cell. 2013 Jan;25(1):38-55. doi: 10.1105/tpc.112.106062. Epub 2013 Jan 29.
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Effects of molecular crowding on the dynamics of intrinsically disordered proteins.分子拥挤对无规卷曲蛋白质动力学的影响。
PLoS One. 2012;7(11):e49876. doi: 10.1371/journal.pone.0049876. Epub 2012 Nov 26.