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一种用于鉴定青年发病型成年糖尿病(MODY)致病基因突变的三步程序化方法。

A three-step programmed method for the identification of causative gene mutations of maturity onset diabetes of the young (MODY).

作者信息

Li Qian, Cao Xi, Qiu Hai-Yan, Lu Jing, Gao Rui, Liu Chao, Yuan Ming-Xia, Yang Guang-Ran, Yang Jin-Kui

机构信息

Department of Endocrinology, Beijing Tongren Hospital, Capital Medical University, Beijing 100730, China.

Department of Endocrinology, Beijing Tongren Hospital, Capital Medical University, Beijing 100730, China; Beijing Key Laboratory of Diabetes Research and Care, Beijing 100730, China.

出版信息

Gene. 2016 Aug 22;588(2):141-8. doi: 10.1016/j.gene.2016.05.021. Epub 2016 May 14.

Abstract

To establish a three-step programmed method to find gene mutations related to maturity onset diabetes of the young (MODY). Target region capture and next-generation sequencing (NGS) were performed using customized oligonucleotide probes designed to capture suspected genes for MODY in 11 probands with clinically diagnosed MODY. The suspected associations of certain genes with MODY were then confirmed by Sanger sequencing in the probands and their family members. Finally, to validate variants of one of the genes of interest (glucokinase, GCK) as pathogenic mutations, protein function editing by the variant genes was assessed. In the target region capture and NGS phase, a total of nine variants of seven genes (GCK, WFS1, SLC19A2, SH2B1, SERPINB4, RFX6, and GATA6) were identified in eight probands. Two heterozygous GCK mutations located on the same allele (p.Leu77Arg and p.Val101Met) were identified in a MODY family. Sanger sequencing was used to confirm the variants identified by NGS to be present in probands and their diabetic family members, but not in non-diabetic family members. Finally, enzyme kinetic and thermal stability analyses revealed that the p.Leu77Arg mutation or the p.Leu77Arg mutation in combination with the p.Val101Met mutation inactivates GCK function and stability, while mutation of p.Val101Met alone does not. The p.Leu77Arg but not p.Val101Met GCK mutation is therefore considered a pathogenic mutation associated with MODY. Genetic screening coupled with gene-editing protein function testing is an effective and reliable method by which causative gene mutations of MODY can be identified.

摘要

建立一种三步程序化方法来寻找与青年发病型糖尿病(MODY)相关的基因突变。使用定制的寡核苷酸探针进行目标区域捕获和下一代测序(NGS),这些探针旨在捕获11例临床诊断为MODY的先证者中疑似与MODY相关的基因。然后通过先证者及其家庭成员的桑格测序来确认某些基因与MODY的疑似关联。最后,为了验证其中一个感兴趣基因(葡萄糖激酶,GCK)的变异体为致病突变,评估了变异基因对蛋白质功能的编辑作用。在目标区域捕获和NGS阶段,在8例先证者中鉴定出7个基因(GCK、WFS1、SLC19A2、SH2B1、SERPINB4、RFX6和GATA6)的总共9个变异体。在一个MODY家族中鉴定出位于同一等位基因上的两个杂合GCK突变(p.Leu77Arg和p.Val101Met)。使用桑格测序来确认NGS鉴定出的变异体存在于先证者及其糖尿病家庭成员中,但不存在于非糖尿病家庭成员中。最后,酶动力学和热稳定性分析表明,p.Leu77Arg突变或p.Leu77Arg突变与p.Val101Met突变共同作用会使GCK功能和稳定性失活,而单独的p.Val101Met突变则不会。因此,p.Leu77Arg而非p.Val101Met的GCK突变被认为是与MODY相关的致病突变。基因筛查结合基因编辑蛋白质功能测试是一种有效且可靠的方法,通过该方法可以鉴定出MODY的致病基因突变。

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